RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SSTR3P32745 418 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-209ENST00000428728 GTF2F1P35269 517 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRIM39-209ENST00000428728 USP11P51784 963 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 CRYBB1P53674 252 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-209ENST00000428728 HYAL1Q12794 435 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 FAM178BQ8IXR5 827 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 SLC5A5Q92911 643 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 P2RX5Q93086 422 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 ZNF274Q96GC6 653 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-209ENST00000428728 ZNF668Q96K58 619 aaPredicted RBP19.29■□□□□ 0.68
TRIM39-209ENST00000428728 MAP7D2Q96T17 732 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 TM6SF1Q9BZW5 370 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 PDRG1Q9NUG6 133 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 PLAGL2Q9UPG8 496 aa19.29■□□□□ 0.68
TRIM39-209ENST00000428728 MAGEB2O15479 319 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 GPR32O75388 356 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 JAK3P52333 1124 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 COL19A1Q14993 1142 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 CLUL1Q15846 466 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 SPOUT1Q5T280 376 aaKnown RBP19.28■□□□□ 0.68
TRIM39-209ENST00000428728 EFCAB12Q6NXP0 572 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 CPLX2Q6PUV4 134 aaKnown RBP19.28■□□□□ 0.68
TRIM39-209ENST00000428728 BLIDQ8IZY5 108 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 KLHL23Q8NBE8 558 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 RIT2Q99578 217 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 C22orf23Q9BZE7 217 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 IGFLR1Q9H665 355 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 RGS18Q9NS28 235 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 C1orf112Q9NSG2 853 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 HCSTQ9UBK5 93 aa19.28■□□□□ 0.68
TRIM39-209ENST00000428728 TBKBP1A7MCY6 615 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 C9IYK1 514 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 DNAJB1P25685 340 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 SFNP31947 248 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 NLRP11P59045 1033 aaKnown RBP19.27■□□□□ 0.68
TRIM39-209ENST00000428728 CAMK1Q14012 370 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 PUS10Q3MIT2 529 aaKnown RBP19.27■□□□□ 0.68
TRIM39-209ENST00000428728 SLC24A5Q71RS6 500 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 MIER3Q7Z3K6 550 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 GJD3Q8N144 294 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 SCLT1Q96NL6 688 aa19.27■□□□□ 0.68
TRIM39-209ENST00000428728 FAM86C2PA6NEL3 165 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 LINC01565O15544 149 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 DTNBO60941 627 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 TBX10O75333 385 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 PSMD10O75832 226 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 FGFR1P11362 822 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 TMOD1P28289 359 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 LTBRP36941 435 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 DLX2Q07687 328 aaPredicted RBP19.26■□□□□ 0.67
TRIM39-209ENST00000428728 NPY5RQ15761 445 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 NAALADL2Q58DX5 795 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 FAM102BQ5T8I3 360 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 LINC01465Q8N7H1 131 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 DAGLBQ8NCG7 672 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 SPPL3Q8TCT6 385 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 POF1BQ8WVV4 589 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 NRBP2Q9NSY0 501 aa19.26■□□□□ 0.67
TRIM39-209ENST00000428728 SEPT9Q9UHD8 586 aaPredicted RBP19.26■□□□□ 0.67
TRIM39-209ENST00000428728 TMEM150BA6NC51 233 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 M0R2N6 131 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 NCK2O43639 380 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 IRS1P35568 1242 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 TBC1D8BQ0IIM8 1120 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 NONOQ15233 471 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRIM39-209ENST00000428728 INF2Q27J81 1249 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 CTC1Q2NKJ3 1217 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 Q4G0T1 1027 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 ADGRD2Q7Z7M1 963 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 ATP6V0A4Q9HBG4 840 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
TRIM39-209ENST00000428728 KCNJ14Q9UNX9 436 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 FAM50BQ9Y247 325 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 PCDHGC5Q9Y5F6 944 aa19.25■□□□□ 0.67
TRIM39-209ENST00000428728 NDUFV1P49821 464 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 GPC3P51654 580 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 SCRN1Q12765 414 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 DSC3Q14574 896 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 MTERF2Q49AM1 385 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 TMEM31Q5JXX7 168 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 PPP2R3CQ969Q6 453 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 LRFN3Q9BTN0 628 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 ADAMTS10Q9H324 1103 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 TMEM161AQ9NX61 479 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 DDX25Q9UHL0 483 aaKnown RBP19.24■□□□□ 0.67
TRIM39-209ENST00000428728 PCDHB12Q9Y5F1 795 aa19.24■□□□□ 0.67
TRIM39-209ENST00000428728 CYP3A7-CYP3A51PA0A087WV96 503 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 SLC37A4O43826 429 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 FGFR4P22455 802 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 CYP3A7P24462 503 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 LETM2Q2VYF4 491 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 GALNT17Q6IS24 598 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 KRT25Q7Z3Z0 450 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 THNSL1Q8IYQ7 743 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 RDM1Q8NG50 284 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 ETNPPLQ8TBG4 499 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 SH2D3AQ9BRG2 576 aa19.23■□□□□ 0.67
TRIM39-209ENST00000428728 SLKQ9H2G2 1235 aaPredicted RBP19.23■□□□□ 0.67
TRIM39-209ENST00000428728 CDKL5O76039 1030 aa19.22■□□□□ 0.67
TRIM39-209ENST00000428728 EIF4BP23588 611 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms