RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SPATA32Q96LK8 384 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 MAP7D2Q96T17 732 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 ANKEF1Q9NU02 776 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 PDE4DIPQ5VU43 2346 aa16.24■□□□□ 0.19
SGCE-204ENST00000428696 CEP290O15078 2479 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 E9PMD0 336 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
SGCE-204ENST00000428696 LYPLA2O95372 231 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 YEATS4O95619 227 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 TARBP2Q15633 366 aaKnown RBP16.23■□□□□ 0.19
SGCE-204ENST00000428696 KIZQ2M2Z5 673 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 TRIM71Q2Q1W2 868 aaKnown RBP16.23■□□□□ 0.19
SGCE-204ENST00000428696 USP49Q70CQ1 688 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 RPUSD2Q8IZ73 545 aaKnown RBP16.23■□□□□ 0.19
SGCE-204ENST00000428696 KIAA0319LQ8IZA0 1049 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 KCNG4Q8TDN1 519 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 MMTAG2Q9BU76 263 aaKnown RBP16.23■□□□□ 0.19
SGCE-204ENST00000428696 BHMT2Q9H2M3 363 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 SUCLA2Q9P2R7 463 aaPredicted RBP16.23■□□□□ 0.19
SGCE-204ENST00000428696 CDY2AQ9Y6F7 541 aa16.23■□□□□ 0.19
SGCE-204ENST00000428696 XRCC6P12956 609 aaKnown RBP eCLIP16.22■□□□□ 0.19
SGCE-204ENST00000428696 RFC5P40937 340 aa16.22■□□□□ 0.19
SGCE-204ENST00000428696 RARRES1P49788 294 aa16.22■□□□□ 0.19
SGCE-204ENST00000428696 MRPS6P82932 125 aaKnown RBP16.22■□□□□ 0.19
SGCE-204ENST00000428696 PPIGQ13427 754 aaKnown RBP eCLIP16.22■□□□□ 0.19
SGCE-204ENST00000428696 KARSQ15046 597 aaKnown RBP16.22■□□□□ 0.19
SGCE-204ENST00000428696 EXOC8Q8IYI6 725 aa16.22■□□□□ 0.19
SGCE-204ENST00000428696 NME8Q8N427 588 aa16.22■□□□□ 0.19
SGCE-204ENST00000428696 SYMPKQ92797 1274 aaKnown RBP16.22■□□□□ 0.19
SGCE-204ENST00000428696 IPO9Q96P70 1041 aaKnown RBP16.22■□□□□ 0.19
SGCE-204ENST00000428696 JPH2Q9BR39 696 aaPredicted RBP16.22■□□□□ 0.19
SGCE-204ENST00000428696 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
SGCE-204ENST00000428696 KDM3AQ9Y4C1 1321 aa16.22■□□□□ 0.19
SGCE-204ENST00000428696 MYH9P35579 1960 aaKnown RBP16.22■□□□□ 0.19
SGCE-204ENST00000428696 KAT6AQ92794 2004 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 PPP6R2O75170 966 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 MAFO75444 373 aaPredicted RBP16.21■□□□□ 0.19
SGCE-204ENST00000428696 CHRNA1P02708 482 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 SRGAP2CP0DJJ0 459 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 NLRP11P59045 1033 aaKnown RBP16.21■□□□□ 0.19
SGCE-204ENST00000428696 DRP2Q13474 957 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 EMC2Q15006 297 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 PRPF38BQ5VTL8 546 aaKnown RBP16.21■□□□□ 0.19
SGCE-204ENST00000428696 PADI6Q6TGC4 694 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 RHPN2Q8IUC4 686 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 NLRP7Q8WX94 980 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 PNMA5Q96PV4 448 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 MTRQ99707 1265 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 NT5C3AQ9H0P0 336 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 GDPD2Q9HCC8 539 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 POLD4Q9HCU8 107 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 CHMP5Q9NZZ3 219 aa16.21■□□□□ 0.19
SGCE-204ENST00000428696 CUTAO60888 179 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 FGBP02675 491 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 GHRP10912 638 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 DDIT3P35638 169 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 EPHB4P54760 987 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 GRB10Q13322 594 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 FAM102BQ5T8I3 360 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 RRAGBQ5VZM2 374 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 OTOP2Q7RTS6 562 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 KSR1Q8IVT5 923 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 PDILTQ8N807 584 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 NLRP4Q96MN2 994 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 CELF4Q9BZC1 486 aaKnown RBP16.2■□□□□ 0.18
SGCE-204ENST00000428696 CDHR5Q9HBB8 845 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 ATP6V0A4Q9HBG4 840 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 IL23AQ9NPF7 189 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 DBR1Q9UK59 544 aaKnown RBP16.2■□□□□ 0.18
SGCE-204ENST00000428696 RCOR1Q9UKL0 485 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
SGCE-204ENST00000428696 TRPV2Q9Y5S1 764 aa16.2■□□□□ 0.18
SGCE-204ENST00000428696 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
SGCE-204ENST00000428696 ZBBXA8MT70 800 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 CAND2O75155 1236 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 DGAT1O75907 488 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 EYA4O95677 639 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 RPLP2P05387 115 aaKnown RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 PLCG1P19174 1290 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 MUTP22033 750 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 RAD51AP2Q09MP3 1159 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 ZNF365Q70YC5 407 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 KCNK18Q7Z418 384 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 LEO1Q8WVC0 666 aaPredicted RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 PRPF31Q8WWY3 499 aaKnown RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 PSPC1Q8WXF1 523 aaKnown RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 OSMRQ99650 979 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 DHX33Q9H6R0 707 aaKnown RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 COLQQ9Y215 455 aaPredicted RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 NBNO60934 754 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 PLA2G4BP0C869 781 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 RFC2P35250 354 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 NFX1Q12986 1120 aaKnown RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
SGCE-204ENST00000428696 RPAINQ86UA6 219 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 TCP11Q8WWU5 503 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms