RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 BICDL1Q6ZP65 573 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 GPIHBP1Q8IV16 184 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 HAPLN3Q96S86 360 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 IWS1Q96ST2 819 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 TRIM51Q9BSJ1 452 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 TRIM9Q9C026 710 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 RNF41Q9H4P4 317 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 OCEL1Q9H607 264 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 PREBQ9HCU5 417 aa17.4■□□□□ 0.38
C9orf3-206ENST00000428313 LARSQ9P2J5 1176 aaKnown RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 SEC63Q9UGP8 760 aaKnown RBP17.4■□□□□ 0.38
C9orf3-206ENST00000428313 ATAD5Q96QE3 1844 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 RASGRF2O14827 1237 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 RASA1P20936 1047 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 HOXA7P31268 230 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-206ENST00000428313 SERPINB4P48594 390 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 PTENP60484 403 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 KCNMA1Q12791 1236 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 SEC23AQ15436 765 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 INTS8Q75QN2 995 aaKnown RBP17.39■□□□□ 0.37
C9orf3-206ENST00000428313 SLFN11Q7Z7L1 901 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 ECHDC2Q86YB7 292 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 PIH1D3Q9NQM4 214 aaKnown RBP17.39■□□□□ 0.37
C9orf3-206ENST00000428313 STXBP5LQ9Y2K9 1186 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 COMMD3-BMI1R4GMX3 469 aa17.39■□□□□ 0.37
C9orf3-206ENST00000428313 ATP6V1G1O75348 118 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 SLC39A6Q13433 755 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 KPNB1Q14974 876 aaKnown RBP17.38■□□□□ 0.37
C9orf3-206ENST00000428313 FOXR2Q6PJQ5 311 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 EXOC3L1Q86VI1 746 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 STKLD1Q8NE28 680 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 SUPT20HQ8NEM7 779 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 LRRC8CQ8TDW0 803 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 LRRC59Q96AG4 307 aaKnown RBP17.38■□□□□ 0.37
C9orf3-206ENST00000428313 CCDC88AQ3V6T2 1871 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 SMIM23A6NLE4 172 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 ATP9AO75110 1047 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 IDH1O75874 414 aaKnown RBP17.38■□□□□ 0.37
C9orf3-206ENST00000428313 NOL4O94818 638 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 CCDC166P0CW27 439 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 RASSF2P50749 326 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 LRRC63Q05C16 580 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 SETDB1Q15047 1291 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 MTFR1Q15390 333 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 CNPY1Q3B7I2 92 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 SPDYAQ5MJ70 313 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 ZNF365Q70YC5 407 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 CADPS2Q86UW7 1296 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 EPS8L3Q8TE67 593 aaKnown RBP17.38■□□□□ 0.37
C9orf3-206ENST00000428313 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.38■□□□□ 0.374e-6■■■□□ 18.4
C9orf3-206ENST00000428313 DAAM1Q9Y4D1 1078 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 PCDH11XQ9BZA7 1347 aa17.38■□□□□ 0.37
C9orf3-206ENST00000428313 TRAFD1O14545 582 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-206ENST00000428313 FCER1AP12319 257 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 ASIC1P78348 528 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 DR1Q01658 176 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 MCL1Q07820 350 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 LSAMPQ13449 338 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 DHX34Q14147 1143 aaKnown RBP17.37■□□□□ 0.37
C9orf3-206ENST00000428313 SH2D4BQ5SQS7 431 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 ZDHHC24Q6UX98 284 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 PEX26Q7Z412 305 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 DAAM2Q86T65 1068 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 SYCE1Q8N0S2 351 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 KIAA0895Q8NCT3 520 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 NR1H4Q96RI1 486 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-206ENST00000428313 SPATA16Q9BXB7 569 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 CARD9Q9H257 536 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 SLC52A2Q9HAB3 445 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 CCDC87Q9NVE4 849 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 USP40Q9NVE5 1235 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 DIS3Q9Y2L1 958 aaKnown RBP17.37■□□□□ 0.37
C9orf3-206ENST00000428313 POTEFA5A3E0 1075 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 POTEIP0CG38 1075 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 POTEJP0CG39 1038 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 ATP5DP30049 168 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 KLHL30Q0D2K2 578 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 CGB2Q6NT52 195 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 POTEEQ6S8J3 1075 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 TPCN2Q8NHX9 752 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 CCDC113Q9H0I3 377 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 MYLK2Q9H1R3 596 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 TLE6Q9H808 572 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 ADAMTS1Q9UHI8 967 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 RREB1Q92766 1687 aa17.37■□□□□ 0.37
C9orf3-206ENST00000428313 TMEM120BA0PK00 339 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 CETN3O15182 167 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 FAM200BP0CF97 657 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 CALM1P0DP23 149 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 CALM2P0DP24 149 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 CALM3P0DP25 149 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-206ENST00000428313 POLGP54098 1239 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-206ENST00000428313 VSIG1Q86XK7 387 aa17.36■□□□□ 0.37
C9orf3-206ENST00000428313 ZNF496Q96IT1 587 aaPredicted RBP17.36■□□□□ 0.37
C9orf3-206ENST00000428313 SLX1AQ9BQ83 275 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms