RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 IGSF22Q8N9C0 903 aa7.8□□□□□ -1.16
CDC7-203ENST00000428239 DEPTORQ8TB45 409 aa7.8□□□□□ -1.16
CDC7-203ENST00000428239 POLR3CQ9BUI4 534 aaPredicted RBP7.8□□□□□ -1.16
CDC7-203ENST00000428239 KCNH3Q9ULD8 1083 aa7.8□□□□□ -1.16
CDC7-203ENST00000428239 IGSF9BQ9UPX0 1349 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 DGAT1O75907 488 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 CLSTN1O94985 981 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 ATG7O95352 703 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 AMPD3Q01432 767 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 MTHFD1LQ6UB35 978 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 SH3RF1Q7Z6J0 888 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 MCPH1Q8NEM0 835 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 TCP11Q8WWU5 503 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 LARP4BQ92615 738 aaKnown RBP7.79□□□□□ -1.16
CDC7-203ENST00000428239 BICD1Q96G01 975 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 OSMRQ99650 979 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 HSD17B14Q9BPX1 270 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 POLR3FQ9H1D9 316 aaPredicted RBP7.79□□□□□ -1.16
CDC7-203ENST00000428239 GRIN2DO15399 1336 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 SFI1A8K8P3 1242 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 CSDE1O75534 798 aaKnown RBP7.79□□□□□ -1.16
CDC7-203ENST00000428239 ERLIN2O94905 339 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 SPIRE1Q08AE8 756 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 FAM117BQ6P1L5 589 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 FAM126BQ8IXS8 530 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 MYCT1Q8N699 235 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 RNF149Q8NC42 400 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 AFAP1L1Q8TED9 768 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 TCHPQ9BT92 498 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 GPRC5CQ9NQ84 441 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 ANKEF1Q9NU02 776 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 WRAP73Q9P2S5 460 aaPredicted RBP7.79□□□□□ -1.16
CDC7-203ENST00000428239 HOOK1Q9UJC3 728 aaKnown RBP7.79□□□□□ -1.16
CDC7-203ENST00000428239 RCOR1Q9UKL0 485 aa7.79□□□□□ -1.16
CDC7-203ENST00000428239 ACRP10323 421 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 COL6A1P12109 1028 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 RARRES1P49788 294 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 PTPN11Q06124 597 aaPredicted RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 TFDP1Q14186 410 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 RUFY4Q6ZNE9 571 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 LRRC8DQ7L1W4 858 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 CATSPER4Q7RTX7 472 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 ZBTB8OSQ8IWT0 167 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 BADQ92934 168 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 SEZ6LQ9BYH1 1024 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 UBE2OQ9C0C9 1292 aaKnown RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 TBC1D7Q9P0N9 293 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 CDY2AQ9Y6F7 541 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 KIAA1217Q5T5P2 1943 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 RPS6KA5O75582 802 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 EYA4O95677 639 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 SPATA31C1P0DKV0 1188 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 HARSP12081 509 aaKnown RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 SELPP16109 830 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 PFKFB1P16118 471 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 ATP4AP20648 1035 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 RFC5P40937 340 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 SMTNP53814 917 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 FAAP100Q0VG06 881 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 PTK7Q13308 1070 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 DMP1Q13316 513 aaPredicted RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 ZNF618Q5T7W0 954 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 ADALQ6DHV7 355 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 OTOP2Q7RTS6 562 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 KSR1Q8IVT5 923 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 ZNF579Q8NAF0 562 aaKnown RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 PYM1Q9BRP8 204 aaKnown RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 ZBED2Q9BTP6 218 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 MTIF3Q9H2K0 278 aaKnown RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 LCTP09848 1927 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 BRCA2P51587 3418 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 HAS3O00219 553 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 CSF2RAP15509 400 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 KCNJ6P48051 423 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 MNX1P50219 401 aaPredicted RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 PEX3P56589 373 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 PLCB2Q00722 1185 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 PAK2Q13177 524 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 CAGE1Q8TC20 777 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 PRPF31Q8WWY3 499 aaKnown RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 DRC1Q96MC2 740 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 TOX2Q96NM4 488 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 GCOM2Q9BZD3 368 aaPredicted RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 TRIM6Q9C030 488 aaPredicted RBP7.78□□□□□ -1.16
CDC7-203ENST00000428239 LRRC27Q9C0I9 530 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 PDLIM7Q9NR12 457 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 COL4A3BPQ9Y5P4 624 aa7.78□□□□□ -1.16
CDC7-203ENST00000428239 UMODL1Q5DID0 1318 aa7.77□□□□□ -1.16
CDC7-203ENST00000428239 DENND3A2RUS2 1198 aa7.77□□□□□ -1.17
CDC7-203ENST00000428239 UPP2O95045 317 aa7.77□□□□□ -1.17
CDC7-203ENST00000428239 ACTN1P12814 892 aa7.77□□□□□ -1.17
CDC7-203ENST00000428239 ZSCAN20P17040 1043 aaPredicted RBP7.77□□□□□ -1.17
CDC7-203ENST00000428239 PHKA2P46019 1235 aa7.77□□□□□ -1.17
CDC7-203ENST00000428239 MRPS6P82932 125 aaKnown RBP7.77□□□□□ -1.17
CDC7-203ENST00000428239 FPGSQ05932 587 aa7.77□□□□□ -1.17
CDC7-203ENST00000428239 GRB10Q13322 594 aa7.77□□□□□ -1.17
CDC7-203ENST00000428239 HERC4Q5GLZ8 1057 aaPredicted RBP7.77□□□□□ -1.17
CDC7-203ENST00000428239 ODR4Q5SWX8 454 aa7.77□□□□□ -1.17
CDC7-203ENST00000428239 SHC4Q6S5L8 630 aa7.77□□□□□ -1.17
CDC7-203ENST00000428239 BLZF1Q9H2G9 400 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms