RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ASAP2O43150 1006 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 SLC37A4O43826 429 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 MAFO75444 373 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-203ENST00000428014 STBD1O95210 358 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 MARK3P27448 753 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 RFC5P40937 340 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 PRPHP41219 470 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 CRYBB1P53674 252 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-203ENST00000428014 PRKCEQ02156 737 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 NR5A1Q13285 461 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 PDIA5Q14554 519 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 RILPL1Q5EBL4 403 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 OTUD6AQ7L8S5 288 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 DEFB128Q7Z7B8 93 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 ZNF410Q86VK4 478 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 CCDC83Q8IWF9 413 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 CRIPAKQ8N1N5 446 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 MAP7D2Q96T17 732 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 INO80BQ9C086 356 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-203ENST00000428014 TTYH1Q9H313 450 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-203ENST00000428014 ELAC1Q9H777 363 aaKnown RBP10.26□□□□□ -0.77
SMC1A-203ENST00000428014 C1orf112Q9NSG2 853 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 ANKEF1Q9NU02 776 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 PKD2L1Q9P0L9 805 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 NOL7Q9UMY1 257 aaKnown RBP10.26□□□□□ -0.77
SMC1A-203ENST00000428014 SAMM50Q9Y512 469 aa10.26□□□□□ -0.77
SMC1A-203ENST00000428014 MORC2Q9Y6X9 1032 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-203ENST00000428014 PPFIA3O75145 1194 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 BMP15O95972 392 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 DNM2P50570 870 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 CHMP4BP1P59074 171 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 TBC1D8BQ0IIM8 1120 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 LPIN1Q14693 890 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 CALCRLQ16602 461 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 RUFY4Q6ZNE9 571 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 CKAP2LQ8IYA6 745 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 DNAJB3Q8WWF6 145 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 SNX21Q969T3 373 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 GUCD1Q96NT3 240 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 POLR3CQ9BUI4 534 aaPredicted RBP10.25□□□□□ -0.77
SMC1A-203ENST00000428014 NFKBIZQ9BYH8 718 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 RAB34Q9BZG1 259 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 DHX33Q9H6R0 707 aaKnown RBP10.25□□□□□ -0.77
SMC1A-203ENST00000428014 RC3H2Q9HBD1 1191 aaKnown RBP10.25□□□□□ -0.77
SMC1A-203ENST00000428014 TUFT1Q9NNX1 390 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 CHST12Q9NRB3 414 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 CDY2AQ9Y6F7 541 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 CHD9Q3L8U1 2897 aa10.25□□□□□ -0.77
SMC1A-203ENST00000428014 ZBBXA8MT70 800 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 SORBS3O60504 671 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 GPR32O75388 356 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 RB1P06400 928 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 STAG3L1P0CL83 205 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 EIF4BP23588 611 aaKnown RBP10.24□□□□□ -0.77
SMC1A-203ENST00000428014 NAALADL2Q58DX5 795 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 EARS2Q5JPH6 523 aaKnown RBP10.24□□□□□ -0.77
SMC1A-203ENST00000428014 ARL6IP4Q66PJ3 421 aaKnown RBP10.24□□□□□ -0.77
SMC1A-203ENST00000428014 HAUS3Q68CZ6 603 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 SLC7A3Q8WY07 619 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 TTC12Q9H892 705 aaPredicted RBP10.24□□□□□ -0.77
SMC1A-203ENST00000428014 CYP26B1Q9NR63 512 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 GJB4Q9NTQ9 266 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 EVPLQ92817 2033 aa10.24□□□□□ -0.77
SMC1A-203ENST00000428014 SIP14410 1827 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 TRANK1O15050 2925 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-203ENST00000428014 C5orf67F2Z3F1 127 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 DDX39AO00148 427 aaKnown RBP10.23□□□□□ -0.77
SMC1A-203ENST00000428014 TLL1O43897 1013 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 MARCH6O60337 910 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 DGAT1O75907 488 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 OR52Z1P0C646 297 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 RPA1P27694 616 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 ERVK-21P61565 698 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 FAM189BP81408 668 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 MXD4Q14582 209 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-203ENST00000428014 EFCAB12Q6NXP0 572 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 ANO5Q75V66 913 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 BRAPQ7Z569 592 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 NPAS4Q8IUM7 802 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 ERMNQ8TAM6 284 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 TCP11Q8WWU5 503 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 CLP1Q92989 425 aaKnown RBP10.23□□□□□ -0.77
SMC1A-203ENST00000428014 ZNF689Q96CS4 500 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-203ENST00000428014 GAS2L1Q99501 681 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-203ENST00000428014 CDX2Q99626 313 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-203ENST00000428014 LXNQ9BS40 222 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 PLVAPQ9BX97 442 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 ADAMTS10Q9H324 1103 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 ERVK-5Q9HDB9 667 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 KCNG1Q9UIX4 513 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 DBR1Q9UK59 544 aaKnown RBP10.23□□□□□ -0.77
SMC1A-203ENST00000428014 PADI3Q9ULW8 664 aa10.23□□□□□ -0.77
SMC1A-203ENST00000428014 EML1O00423 815 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 ENPP3O14638 875 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 HOXA2O43364 376 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 RPS6KA5O75582 802 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 SLITRK3O94933 977 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 GHRP10912 638 aa10.22□□□□□ -0.77
SMC1A-203ENST00000428014 SKIP12755 728 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms