RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SEPT1Q8WYJ6 367 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 KATNAL1Q9BW62 490 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 SMARCAD1Q9H4L7 1026 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 PLEKHA4Q9H4M7 779 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 CNTNAP5Q8WYK1 1306 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 HUS1O60921 280 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 KYAT1Q16773 422 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 HHATQ5VTY9 493 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 XRRA1Q6P2D8 792 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 ATP2A3Q93084 1043 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 ATG4CQ96DT6 458 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 PANX2Q96RD6 677 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 TRIM49BA6NDI0 452 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 CDC42EP1Q00587 391 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 AFAP1L1Q8TED9 768 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 CCSER1Q9C0I3 900 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 DNAJC12Q9UKB3 198 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 GBP1P32455 592 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 SHC4Q6S5L8 630 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 MYRIPQ8NFW9 859 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 POLD4Q9HCU8 107 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 RSPH14Q9UHP6 348 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 GCLMP48507 274 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 CCDC110Q8TBZ0 833 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 MICAL1Q8TDZ2 1067 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 PPP1R13BQ96KQ4 1090 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 EHD4Q9H223 541 aa14.98□□□□□ -0.01
RPL28-202ENST00000426763 FBXO2Q9UK22 296 aaPredicted RBP14.98□□□□□ -0.01
RPL28-202ENST00000426763 PFDN6O15212 129 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 NFIAQ12857 509 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 ERICH1Q86X53 443 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 ZMYND15Q9H091 742 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 SALL1Q9NSC2 1324 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 LGALS16A8MUM7 142 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 MAFGO15525 162 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 DGAT1O75907 488 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 CSPG5O95196 566 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 KRT1P04264 644 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 ATP1A3P13637 1013 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 CASP7P55210 303 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 ZKSCAN4Q969J2 545 aaPredicted RBP14.97□□□□□ -0.01
RPL28-202ENST00000426763 EBAG9O00559 213 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 DYNC1LI2O43237 492 aaPredicted RBP14.97□□□□□ -0.01
RPL28-202ENST00000426763 CYP2B6P20813 491 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 VAMP7P51809 220 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 CCDC6Q16204 474 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 C3orf67Q6ZVT6 689 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 HAUS6Q7Z4H7 955 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 SLC35F6Q8N357 371 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 RGL1Q9NZL6 768 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 KRT71Q3SY84 523 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 ERO1BQ86YB8 467 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 ZMYND12Q9H0C1 365 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 CEP72Q9P209 647 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 SCINQ9Y6U3 715 aa14.97□□□□□ -0.01
RPL28-202ENST00000426763 PRPSAP2O60256 369 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 PPFIA1Q13136 1202 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 SMC1BQ8NDV3 1235 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 BPIFA3Q9BQP9 254 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 DPH5Q9H2P9 285 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 A6NNZ2 444 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 UBE2Q2LH0YL09 131 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 TUBB8Q3ZCM7 444 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 NAA35Q5VZE5 725 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 CPSF3Q9UKF6 684 aaKnown RBP14.96□□□□□ -0.01
RPL28-202ENST00000426763 ESYT2A0FGR8 921 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 BRD3Q15059 726 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 SMAP1Q8IYB5 467 aaPredicted RBP14.96□□□□□ -0.01
RPL28-202ENST00000426763 AGBL1Q96MI9 1066 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 KIF2CQ99661 725 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 TSPY1Q01534 308 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 KCNH2Q12809 1159 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 GPD1LQ8N335 351 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 NUDT12Q9BQG2 462 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 MXRA8Q9BRK3 442 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 SENP2Q9HC62 589 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 WDR70Q9NW82 654 aa14.96□□□□□ -0.01
RPL28-202ENST00000426763 KBTBD13C9JR72 458 aa14.96□□□□□ -0.02
RPL28-202ENST00000426763 TBXAS1P24557 533 aaPredicted RBP14.96□□□□□ -0.02
RPL28-202ENST00000426763 RNF149Q8NC42 400 aa14.96□□□□□ -0.02
RPL28-202ENST00000426763 MAGOHBQ96A72 148 aaKnown RBP14.96□□□□□ -0.02
RPL28-202ENST00000426763 ZNF668Q96K58 619 aaPredicted RBP14.96□□□□□ -0.02
RPL28-202ENST00000426763 MAD2L2Q9UI95 211 aa14.96□□□□□ -0.02
RPL28-202ENST00000426763 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.02
RPL28-202ENST00000426763 NDUFA10O95299 355 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 C6orf222P0C671 652 aaPredicted RBP14.95□□□□□ -0.02
RPL28-202ENST00000426763 GUCY2FP51841 1108 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 AP3M2P53677 418 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 DDR1Q08345 913 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 KCNB1Q14721 858 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 TMEM106CQ9BVX2 250 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 OGFRQ9NZT2 677 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 SUCLA2Q9P2R7 463 aaPredicted RBP14.95□□□□□ -0.02
RPL28-202ENST00000426763 SH3BP5O60239 455 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 SRGAP2BP0DMP2 458 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 PSMC4P43686 418 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 ALKBH5Q6P6C2 394 aaKnown RBP14.95□□□□□ -0.02
RPL28-202ENST00000426763 TTC39CQ8N584 583 aa14.95□□□□□ -0.02
RPL28-202ENST00000426763 FAM205AQ6ZU69 1335 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 420 ms