RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 PTPN22Q9Y2R2 807 aa17.49■□□□□ 0.39
SCRN1-205ENST00000425819 WDR81Q562E7 1941 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 PPP1R3GB7ZBB8 358 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 CAVIN2O95810 425 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 GAP43P17677 238 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 PRCPP42785 496 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 SOX10P56693 466 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 PSMD2Q13200 908 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 EMC2Q15006 297 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 LRRC41Q15345 812 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 LUZP1Q86V48 1076 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 GLIS3Q8NEA6 775 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 TRAPPC12Q8WVT3 735 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 TIPINQ9BVW5 301 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 FGFBP2Q9BYJ0 223 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 UPF3AQ9H1J1 476 aaKnown RBP17.48■□□□□ 0.39
SCRN1-205ENST00000425819 PARVGQ9HBI0 331 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 SPC25Q9HBM1 224 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 XPNPEP3Q9NQH7 507 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 XPNPEP1Q9NQW7 623 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 PDLIM7Q9NR12 457 aa17.48■□□□□ 0.39
SCRN1-205ENST00000425819 DDX20Q9UHI6 824 aaKnown RBP17.48■□□□□ 0.39
SCRN1-205ENST00000425819 MYH9P35579 1960 aaKnown RBP17.47■□□□□ 0.39
SCRN1-205ENST00000425819 FSD2A1L4K1 749 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 ZBTB42B2RXF5 422 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 MYCNP04198 464 aaPredicted RBP17.47■□□□□ 0.39
SCRN1-205ENST00000425819 HSPA8P11142 646 aaKnown RBP17.47■□□□□ 0.39
SCRN1-205ENST00000425819 RFC5P40937 340 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 ZNF131P52739 623 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 GNASQ5JWF2 1037 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 MCPH1Q8NEM0 835 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 SLC7A3Q8WY07 619 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 KAT2BQ92831 832 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
SCRN1-205ENST00000425819 DHX33Q9H6R0 707 aaKnown RBP17.47■□□□□ 0.39
SCRN1-205ENST00000425819 PCDHA2Q9Y5H9 948 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 LOXHD1Q8IVV2 1947 aa17.47■□□□□ 0.39
SCRN1-205ENST00000425819 F2P00734 622 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 INSRRP14616 1297 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 IGBP1P78318 339 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 TBC1D8BQ0IIM8 1120 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 ODR4Q5SWX8 454 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 ADSSL1Q8N142 457 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 AOPEPQ8N6M6 819 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 TMEM143Q96AN5 459 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 MRPL44Q9H9J2 332 aaKnown RBP17.46■□□□□ 0.39
SCRN1-205ENST00000425819 HMX1Q9NP08 348 aaPredicted RBP17.46■□□□□ 0.39
SCRN1-205ENST00000425819 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 PPME1Q9Y570 386 aa17.46■□□□□ 0.39
SCRN1-205ENST00000425819 ADAMTS4O75173 837 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 STX17P56962 302 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 STIM1Q13586 685 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 MFSD10Q14728 455 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 IQCB1Q15051 598 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 KIAA0753Q2KHM9 967 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 ZNF484Q5JVG2 852 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 L1TD1Q5T7N2 865 aaKnown RBP17.45■□□□□ 0.38
SCRN1-205ENST00000425819 PPP1R13LQ8WUF5 828 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 ZBTB10Q96DT7 871 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 BPIFA3Q9BQP9 254 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 POLR3FQ9H1D9 316 aaPredicted RBP17.45■□□□□ 0.38
SCRN1-205ENST00000425819 MAFO75444 373 aaPredicted RBP17.45■□□□□ 0.38
SCRN1-205ENST00000425819 PLS3P13797 630 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 NMT1P30419 496 aaKnown RBP17.45■□□□□ 0.38
SCRN1-205ENST00000425819 PSEN2P49810 448 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 CASP5P51878 434 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 PURAQ00577 322 aaKnown RBP17.45■□□□□ 0.38
SCRN1-205ENST00000425819 PPFIA1Q13136 1202 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 DHX40Q8IX18 779 aaKnown RBP17.45■□□□□ 0.38
SCRN1-205ENST00000425819 FAM178BQ8IXR5 827 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 NELFBQ8WX92 580 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 KIFAP3Q92845 792 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 OLFML3Q9NRN5 406 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 LARSQ9P2J5 1176 aaKnown RBP17.45■□□□□ 0.38
SCRN1-205ENST00000425819 SEL1LQ9UBV2 794 aa17.45■□□□□ 0.38
SCRN1-205ENST00000425819 ARID2Q68CP9 1835 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 BECN2A8MW95 431 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 ZEB2O60315 1214 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 KPNA6O60684 536 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 GCNT3O95395 438 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
SCRN1-205ENST00000425819 HSPA1AP0DMV8 641 aaKnown RBP17.44■□□□□ 0.38
SCRN1-205ENST00000425819 HSPA1BP0DMV9 641 aaKnown RBP17.44■□□□□ 0.38
SCRN1-205ENST00000425819 MYBP10242 640 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 ERCC5P28715 1186 aaPredicted RBP17.44■□□□□ 0.38
SCRN1-205ENST00000425819 LBX1P52954 281 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 NKX3-2P78367 333 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 PAK1Q13153 545 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 GRIK4Q16099 956 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 LRRC71Q8N4P6 559 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 BSNDQ8WZ55 320 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 FIZ1Q96SL8 496 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 SUGCTQ9HAC7 445 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 GRPEL1Q9HAV7 217 aa17.44■□□□□ 0.38
SCRN1-205ENST00000425819 PCNTO95613 3336 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 PSMA7O14818 248 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 C22orf31O95567 290 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 SMIM10L2AP0DMW4 78 aa17.43■□□□□ 0.38
SCRN1-205ENST00000425819 SMIM10L2BP0DMW5 78 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms