RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 PFKFB1P16118 471 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 NPEPPSP55786 919 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 PADI6Q6TGC4 694 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 SV2BQ7L1I2 683 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 CEP57L1Q8IYX8 460 aa26.8■■□□□ 1.88
APOE-202ENST00000425718 BMP2KQ9NSY1 1161 aaPredicted RBP26.8■■□□□ 1.88
APOE-202ENST00000425718 IGKV6-21A0A0C4DH24 114 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 POLR2DO15514 142 aaKnown RBP26.79■■□□□ 1.88
APOE-202ENST00000425718 EMC2Q15006 297 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 MARCH8Q5T0T0 291 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 METTL13Q8N6R0 699 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 PDILTQ8N807 584 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 CEP89Q96ST8 783 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 PLIN2Q99541 437 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 TRMT13Q9NUP7 481 aaKnown RBP26.79■■□□□ 1.88
APOE-202ENST00000425718 PRKAG2Q9UGJ0 569 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 KCNG1Q9UIX4 513 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 HPSEQ9Y251 543 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 DNAH12Q6ZR08 3092 aa26.79■■□□□ 1.88
APOE-202ENST00000425718 A0A1B0GVL5 298 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 M0QZ92 97 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 SSBP05455 408 aaKnown RBP eCLIP26.78■■□□□ 1.88
APOE-202ENST00000425718 CYP11B2P19099 503 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 IER5Q5VY09 327 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 EFCAB12Q6NXP0 572 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 TRAPPC12Q8WVT3 735 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 TRPV6Q9H1D0 765 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 TNMDQ9H2S6 317 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 BLOC1S4Q9NUP1 217 aa26.78■■□□□ 1.88
APOE-202ENST00000425718 TMEM150BA6NC51 233 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 PITPNM1O00562 1244 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 ZBTB39O15060 712 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 ASAP2O43150 1006 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 EVI5O60447 810 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 PARNO95453 639 aaKnown RBP26.77■■□□□ 1.88
APOE-202ENST00000425718 SLC12A3P55017 1021 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 RBL2Q08999 1139 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 KANK3Q6NY19 840 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 KCNK18Q7Z418 384 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 DHX58Q96C10 678 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 TMEM39AQ9NV64 488 aa26.77■■□□□ 1.88
APOE-202ENST00000425718 USO1O60763 962 aaKnown RBP26.76■■□□□ 1.87
APOE-202ENST00000425718 PRPF40AO75400 957 aaKnown RBP26.76■■□□□ 1.87
APOE-202ENST00000425718 PTMSP20962 102 aa26.76■■□□□ 1.87
APOE-202ENST00000425718 FAM160A1Q05DH4 1040 aa26.76■■□□□ 1.87
APOE-202ENST00000425718 FAAP100Q0VG06 881 aa26.76■■□□□ 1.87
APOE-202ENST00000425718 MXD4Q14582 209 aaPredicted RBP26.76■■□□□ 1.87
APOE-202ENST00000425718 E2F4Q16254 413 aa26.76■■□□□ 1.87
APOE-202ENST00000425718 PSPC1Q8WXF1 523 aaKnown RBP26.76■■□□□ 1.87
APOE-202ENST00000425718 KIFAP3Q92845 792 aa26.76■■□□□ 1.87
APOE-202ENST00000425718 PANK2Q9BZ23 570 aa26.76■■□□□ 1.87
APOE-202ENST00000425718 SUGCTQ9HAC7 445 aa26.76■■□□□ 1.87
APOE-202ENST00000425718 MYL1P05976 194 aa26.75■■□□□ 1.87
APOE-202ENST00000425718 SLFN14P0C7P3 912 aa26.75■■□□□ 1.87
APOE-202ENST00000425718 GUCY2CP25092 1073 aa26.75■■□□□ 1.87
APOE-202ENST00000425718 RGS19P49795 217 aa26.75■■□□□ 1.87
APOE-202ENST00000425718 ZNF200P98182 395 aaPredicted RBP26.75■■□□□ 1.87
APOE-202ENST00000425718 RINT1Q6NUQ1 792 aa26.75■■□□□ 1.87
APOE-202ENST00000425718 DRC1Q96MC2 740 aa26.75■■□□□ 1.87
APOE-202ENST00000425718 PDLIM7Q9NR12 457 aa26.75■■□□□ 1.87
APOE-202ENST00000425718 HOOK1Q9UJC3 728 aaKnown RBP26.75■■□□□ 1.87
APOE-202ENST00000425718 NR2E3Q9Y5X4 410 aa26.75■■□□□ 1.87
APOE-202ENST00000425718 KRT18P05783 430 aaKnown RBP26.74■■□□□ 1.87
APOE-202ENST00000425718 NDUFA8P51970 172 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 HIC1Q14526 733 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 MCM6Q14566 821 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 NAALADL2Q58DX5 795 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 C1orf186Q6ZWK4 172 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 GPBP1Q86WP2 473 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 LINC01465Q8N7H1 131 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 PPP1R13LQ8WUF5 828 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 DPF3Q92784 378 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 SH2D3AQ9BRG2 576 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 C17orf75Q9HAS0 396 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 ODF2LQ9ULJ1 636 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 AKT3Q9Y243 479 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 TANC1Q9C0D5 1861 aa26.74■■□□□ 1.87
APOE-202ENST00000425718 A0A087X0B3 334 aa26.73■■□□□ 1.87
APOE-202ENST00000425718 KIAA0355O15063 1070 aa26.73■■□□□ 1.87
APOE-202ENST00000425718 PPP2R5AQ15172 486 aa26.73■■□□□ 1.87
APOE-202ENST00000425718 FAM43BQ6ZT52 329 aaPredicted RBP26.73■■□□□ 1.87
APOE-202ENST00000425718 TIGD1Q96MW7 591 aa26.73■■□□□ 1.87
APOE-202ENST00000425718 HIPK3Q9H422 1215 aa26.73■■□□□ 1.87
APOE-202ENST00000425718 KBTBD4Q9NVX7 518 aa26.73■■□□□ 1.87
APOE-202ENST00000425718 TBX21Q9UL17 535 aa26.73■■□□□ 1.87
APOE-202ENST00000425718 A0A087WWV3 80 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 ZNF202O95125 648 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 THPOP40225 353 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 TFDP1Q14186 410 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 KIAA0319LQ8IZA0 1049 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 LRRC71Q8N4P6 559 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 DNAJB3Q8WWF6 145 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 IFT74Q96LB3 600 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 CTAGE1Q96RT6 745 aa26.72■■□□□ 1.87
APOE-202ENST00000425718 FAM49AQ9H0Q0 323 aaPredicted RBP26.72■■□□□ 1.87
APOE-202ENST00000425718 SUCLA2Q9P2R7 463 aaPredicted RBP26.72■■□□□ 1.87
APOE-202ENST00000425718 KINO60870 393 aaKnown RBP26.71■■□□□ 1.87
APOE-202ENST00000425718 CLCN3P51790 818 aa26.71■■□□□ 1.87
APOE-202ENST00000425718 MRPS6P82932 125 aaKnown RBP26.71■■□□□ 1.87
APOE-202ENST00000425718 DHX8Q14562 1220 aaKnown RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms