RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 KIF2AO00139 706 aaPredicted RBP29.15■■■□□ 2.26
LDB1-202ENST00000425280 AKAP3O75969 853 aa29.15■■■□□ 2.26
LDB1-202ENST00000425280 FKBP1BP68106 108 aa29.15■■■□□ 2.26
LDB1-202ENST00000425280 DRC1Q96MC2 740 aa29.15■■■□□ 2.26
LDB1-202ENST00000425280 MROH8Q9H579 483 aa29.15■■■□□ 2.26
LDB1-202ENST00000425280 GBA2Q9HCG7 927 aaPredicted RBP29.15■■■□□ 2.26
LDB1-202ENST00000425280 DNAJC25-GNG10A0A024R161 153 aa29.14■■■□□ 2.26
LDB1-202ENST00000425280 SLC16A3O15427 465 aaKnown RBP29.14■■■□□ 2.26
LDB1-202ENST00000425280 KCNMA1Q12791 1236 aa29.14■■■□□ 2.26
LDB1-202ENST00000425280 GPRC5CQ9NQ84 441 aa29.14■■■□□ 2.26
LDB1-202ENST00000425280 ARMCX3Q9UH62 379 aaPredicted RBP29.14■■■□□ 2.26
LDB1-202ENST00000425280 ADGRG1Q9Y653 693 aa29.14■■■□□ 2.26
LDB1-202ENST00000425280 EPHB6O15197 1021 aa29.14■■■□□ 2.25
LDB1-202ENST00000425280 ATG7O95352 703 aa29.14■■■□□ 2.25
LDB1-202ENST00000425280 CETPP11597 493 aa29.14■■■□□ 2.25
LDB1-202ENST00000425280 UBA1P22314 1058 aaKnown RBP29.14■■■□□ 2.25
LDB1-202ENST00000425280 KCTD2Q14681 263 aa29.14■■■□□ 2.25
LDB1-202ENST00000425280 WDR59Q6PJI9 974 aa29.14■■■□□ 2.25
LDB1-202ENST00000425280 MMRN2Q9H8L6 949 aa29.14■■■□□ 2.25
LDB1-202ENST00000425280 FAM207AQ9NSI2 230 aaPredicted RBP29.14■■■□□ 2.25
LDB1-202ENST00000425280 ARID2Q68CP9 1835 aa29.14■■■□□ 2.25
LDB1-202ENST00000425280 IGSF9BQ9UPX0 1349 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 CASP4P49662 377 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 ZNF592Q92610 1267 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 CHP1Q99653 195 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 GBP3Q9H0R5 595 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 SYNGAP1Q96PV0 1343 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 SOCS7O14512 581 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 GTF2A2P52657 109 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 PRKCEQ02156 737 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 MKRN3Q13064 507 aaKnown RBP29.13■■■□□ 2.25
LDB1-202ENST00000425280 TSR1Q2NL82 804 aaKnown RBP29.13■■■□□ 2.25
LDB1-202ENST00000425280 ZNF526Q8TF50 670 aaPredicted RBP29.13■■■□□ 2.25
LDB1-202ENST00000425280 CEP170P1Q96L14 293 aa29.13■■■□□ 2.25
LDB1-202ENST00000425280 CCDC175P0C221 793 aa29.12■■■□□ 2.25
LDB1-202ENST00000425280 ALCAMQ13740 583 aa29.12■■■□□ 2.25
LDB1-202ENST00000425280 MEA1Q16626 185 aa29.12■■■□□ 2.25
LDB1-202ENST00000425280 FAM102BQ5T8I3 360 aa29.12■■■□□ 2.25
LDB1-202ENST00000425280 WDR78Q5VTH9 848 aa29.12■■■□□ 2.25
LDB1-202ENST00000425280 HS2ST1Q7LGA3 356 aa29.12■■■□□ 2.25
LDB1-202ENST00000425280 SHCBP1Q8NEM2 672 aa29.12■■■□□ 2.25
LDB1-202ENST00000425280 GTF3C2Q8WUA4 911 aaPredicted RBP29.12■■■□□ 2.25
LDB1-202ENST00000425280 AGPAT3Q9NRZ7 376 aa29.12■■■□□ 2.25
LDB1-202ENST00000425280 PDHXO00330 501 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 EPB41P11171 864 aaKnown RBP29.11■■■□□ 2.25
LDB1-202ENST00000425280 KCNH2Q12809 1159 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 ZNF397Q8NF99 534 aaPredicted RBP29.11■■■□□ 2.25
LDB1-202ENST00000425280 METTL14Q9HCE5 456 aaKnown RBP29.11■■■□□ 2.25
LDB1-202ENST00000425280 SLC45A1Q9Y2W3 748 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 CCL15-CCL14A0A0B4J2E2 113 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 GOLGA6L9A6NEM1 432 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 BTBD19C9JJ37 291 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 CCL15Q16663 113 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 EEPD1Q7L9B9 569 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 MPHOSPH6Q99547 160 aaKnown RBP29.11■■■□□ 2.25
LDB1-202ENST00000425280 PORCNQ9H237 461 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 PAXBP1Q9Y5B6 917 aa29.11■■■□□ 2.25
LDB1-202ENST00000425280 SYCP3Q8IZU3 236 aa29.1■■■□□ 2.25
LDB1-202ENST00000425280 BRI3BPQ8WY22 251 aa29.1■■■□□ 2.25
LDB1-202ENST00000425280 ST6GALNAC4Q9H4F1 302 aa29.1■■■□□ 2.25
LDB1-202ENST00000425280 DMAC2Q9NW81 257 aa29.1■■■□□ 2.25
LDB1-202ENST00000425280 SEPT9Q9UHD8 586 aaPredicted RBP29.1■■■□□ 2.25
LDB1-202ENST00000425280 MYH9P35579 1960 aaKnown RBP29.1■■■□□ 2.25
LDB1-202ENST00000425280 ZNFX1Q9P2E3 1918 aaKnown RBP29.09■■■□□ 2.25
LDB1-202ENST00000425280 FARP2O94887 1054 aaPredicted RBP29.09■■■□□ 2.25
LDB1-202ENST00000425280 CELF2O95319 508 aaKnown RBP29.09■■■□□ 2.25
LDB1-202ENST00000425280 TGFB3P10600 412 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 PEX3P56589 373 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 PPP2R3AQ06190 1150 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 TRIM65Q6PJ69 517 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 C2orf69Q8N8R5 385 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 NEK11Q8NG66 645 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 GOLGA5Q8TBA6 731 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 BORCS6Q96GS4 357 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 EFCC1Q9HA90 598 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 MAFBQ9Y5Q3 323 aaPredicted RBP29.09■■■□□ 2.25
LDB1-202ENST00000425280 TUBB4AP04350 444 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 NCKAP1LP55160 1127 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 XKR3Q5GH77 459 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 HAUS6Q7Z4H7 955 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 ZNF302Q9NR11 478 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 PDLIM7Q9NR12 457 aa29.09■■■□□ 2.25
LDB1-202ENST00000425280 XRCC5P13010 732 aaKnown RBP29.08■■■□□ 2.25
LDB1-202ENST00000425280 ATP4AP20648 1035 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 GTF2BQ00403 316 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 NEDD9Q14511 834 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 GPRC5AQ8NFJ5 357 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 MYRIPQ8NFW9 859 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 ACCSQ96QU6 501 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 CYP26B1Q9NR63 512 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 ZNHIT6Q9NWK9 470 aaKnown RBP29.08■■■□□ 2.25
LDB1-202ENST00000425280 IGKV6D-21A0A0A0MT36 114 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 SLC16A4O15374 487 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 PSMC2P35998 433 aaKnown RBP29.08■■■□□ 2.25
LDB1-202ENST00000425280 ETF1P62495 437 aaKnown RBP29.08■■■□□ 2.25
LDB1-202ENST00000425280 SYT10Q6XYQ8 523 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 ACRBPQ8NEB7 543 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 KIF18AQ8NI77 898 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 MKNK1Q9BUB5 465 aa29.08■■■□□ 2.25
LDB1-202ENST00000425280 TMEM206Q9H813 350 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms