RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 LGALS2P05162 132 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 MMP3P08254 477 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 MAPTP10636 758 aaKnown RBP11.44□□□□□ -0.58
MDC1-205ENST00000425072 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
MDC1-205ENST00000425072 GRK4P32298 578 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 DNM2P50570 870 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 SMTNP53814 917 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 NPEPPSP55786 919 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 RTP1P59025 263 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 NKX3-2P78367 333 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 MTERF2Q49AM1 385 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
MDC1-205ENST00000425072 RETREG2Q8NC44 543 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 FAM200AQ8TCP9 573 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 TCP11Q8WWU5 503 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 REEP2Q9BRK0 252 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 KATNAL1Q9BW62 490 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 DNAJC25Q9H1X3 360 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 TELO2Q9Y4R8 837 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 THSD7BQ9C0I4 1608 aa11.44□□□□□ -0.58
MDC1-205ENST00000425072 PSMA7O14818 248 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 ASAP2O43150 1006 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 HIP1RO75146 1068 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 MAFO75444 373 aaPredicted RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 ELNP15502 786 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 TMOD1P28289 359 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 MRE11P49959 708 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 ZNF131P52739 623 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 POLGP54098 1239 aaPredicted RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 CDC42EP1Q00587 391 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 EHHADHQ08426 723 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 RAD51AP2Q09MP3 1159 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 TBC1D8BQ0IIM8 1120 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 COASYQ13057 564 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 ALCAMQ13740 583 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 PLCB4Q15147 1175 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 FSCN1Q16658 493 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 GNASQ5JWF2 1037 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 FAM26FQ5R3K3 315 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 L1TD1Q5T7N2 865 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 MAP3K21Q5TCX8 1036 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 PRPF38BQ5VTL8 546 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 IER5Q5VY09 327 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 GAS2L3Q86XJ1 694 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 PCSK9Q8NBP7 692 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 TRPV1Q8NER1 839 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 ENOX1Q8TC92 643 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 IFT74Q96LB3 600 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 NTPCRQ9BSD7 190 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 C16orf70Q9BSU1 422 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 RUSC1Q9BVN2 902 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 UPF3AQ9H1J1 476 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 MRPL44Q9H9J2 332 aaKnown RBP11.43□□□□□ -0.58
MDC1-205ENST00000425072 ATP6V0A4Q9HBG4 840 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 PDLIM7Q9NR12 457 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 OLFML3Q9NRN5 406 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 TRPC6Q9Y210 931 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 PTPN22Q9Y2R2 807 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 MYH11P35749 1972 aa11.43□□□□□ -0.58
MDC1-205ENST00000425072 COL1A2P08123 1366 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 NPHP3-ACAD11A0A0J9YXS1 232 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 BICDL2A1A5D9 508 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 PPP1R3GB7ZBB8 358 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 IKBKBO14920 756 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 USO1O60763 962 aaKnown RBP11.42□□□□□ -0.58
MDC1-205ENST00000425072 FGFR1OPO95684 399 aaKnown RBP11.42□□□□□ -0.58
MDC1-205ENST00000425072 C6orf222P0C671 652 aaPredicted RBP11.42□□□□□ -0.58
MDC1-205ENST00000425072 GNAT1P11488 350 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 PLS3P13797 630 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 BMP6P22004 513 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 PRCPP42785 496 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 CAP1Q01518 475 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 STK4Q13043 487 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 PPP2R5AQ15172 486 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 PKN2Q16513 984 aaKnown RBP11.42□□□□□ -0.58
MDC1-205ENST00000425072 DPCR1Q3MIW9 517 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 ODR4Q5SWX8 454 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 FAM102BQ5T8I3 360 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 PLA2G4FQ68DD2 849 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 RNF180Q86T96 592 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 FAM178BQ8IXR5 827 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 MYOCDQ8IZQ8 938 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 ADSSL1Q8N142 457 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 ARRDC4Q8NCT1 418 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
MDC1-205ENST00000425072 RBSNQ9H1K0 784 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 RNPEPQ9H4A4 650 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 DHX33Q9H6R0 707 aaKnown RBP11.42□□□□□ -0.58
MDC1-205ENST00000425072 SLC39A2Q9NP94 309 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 XPNPEP3Q9NQH7 507 aa11.42□□□□□ -0.58
MDC1-205ENST00000425072 DDX20Q9UHI6 824 aaKnown RBP11.42□□□□□ -0.58
MDC1-205ENST00000425072 NRCAMQ92823 1304 aa11.41□□□□□ -0.58
MDC1-205ENST00000425072 FSD2A1L4K1 749 aa11.41□□□□□ -0.58
MDC1-205ENST00000425072 SFI1A8K8P3 1242 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms