RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 CDHR5Q9HBB8 845 aa25.01■■□□□ 1.59
PTCHD3P2-201ENST00000424937 SQORQ9Y6N5 450 aa25.01■■□□□ 1.59
PTCHD3P2-201ENST00000424937 CA3P07451 260 aa25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 TOB1P50616 345 aaPredicted RBP25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 TPH2Q8IWU9 490 aa25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 NEK9Q8TD19 979 aa25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 CEP89Q96ST8 783 aa25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 OSMRQ99650 979 aa25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 CYP26B1Q9NR63 512 aa25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 PCDHB6Q9Y5E3 794 aa25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 TTC3P53804 2025 aa25■■□□□ 1.59
PTCHD3P2-201ENST00000424937 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 GJB5O95377 273 aa24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 YWHABP31946 246 aaKnown RBP24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 TECP42680 631 aa24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 NPEPPSP55786 919 aa24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 TMEM266Q2M3C6 531 aa24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 TMEM40Q8WWA1 233 aa24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 CEP170P1Q96L14 293 aa24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 PADI3Q9ULW8 664 aa24.99■■□□□ 1.59
PTCHD3P2-201ENST00000424937 NLRC5Q86WI3 1866 aa24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 GPR32O75388 356 aa24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 SLITRK3O94933 977 aa24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 DRP2Q13474 957 aa24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 ZNF668Q96K58 619 aaPredicted RBP24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 SCLT1Q96NL6 688 aa24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 CDX2Q99626 313 aaPredicted RBP24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 FOXD4L1Q9NU39 408 aa24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 NOC2LQ9Y3T9 749 aaKnown RBP24.98■■□□□ 1.59
PTCHD3P2-201ENST00000424937 CHD9Q3L8U1 2897 aa24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 RPS6KA5O75582 802 aa24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 CRYBB1P53674 252 aaPredicted RBP24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 POLGP54098 1239 aaPredicted RBP24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 NLRP11P59045 1033 aaKnown RBP24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 PTGDRQ13258 359 aa24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 GRIN2CQ14957 1233 aa24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 RILPL1Q5EBL4 403 aa24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 OTUD6AQ7L8S5 288 aa24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 ZNF579Q8NAF0 562 aaKnown RBP24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 HSD17B14Q9BPX1 270 aa24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 BMP2KQ9NSY1 1161 aaPredicted RBP24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 COL4A4P53420 1690 aaPredicted RBP24.97■■□□□ 1.59
PTCHD3P2-201ENST00000424937 CDH23Q9H251 3354 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 IGKV6-21A0A0C4DH24 114 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 VPS37CA5D8V6 355 aaPredicted RBP24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 MAFO75444 373 aaPredicted RBP24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 UPP2O95045 317 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 GPC3P51654 580 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 NFX1Q12986 1120 aaKnown RBP24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 XKR9Q5GH70 373 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 C4orf32Q8N8J7 132 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 LINC01599Q8WXQ3 324 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 SLC7A3Q8WY07 619 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 MYLIPQ8WY64 445 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 JPH2Q9BR39 696 aaPredicted RBP24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 PPME1Q9Y570 386 aa24.96■■□□□ 1.59
PTCHD3P2-201ENST00000424937 LCHNA4D1U4 455 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ZBTB39O15060 712 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 LYPLA2O95372 231 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 PDCP20941 246 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 DNM2P50570 870 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ERMNQ8TAM6 284 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 NLRP7Q8WX94 980 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 SNX21Q969T3 373 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 INTS4Q96HW7 963 aaKnown RBP24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 CCDC43Q96MW1 224 aaKnown RBP24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 RAD9AQ99638 391 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 FTHL17Q9BXU8 183 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ADAMTS10Q9H324 1103 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ERVK-5Q9HDB9 667 aa24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.95■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ARHGEF15O94989 841 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 RFC5P40937 340 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 FXR2P51116 673 aaKnown RBP eCLIP24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ODR4Q5SWX8 454 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 FAM228AQ86W67 206 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 HSCBQ8IWL3 235 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ZNF710Q8N1W2 664 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 TOP1MTQ969P6 601 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 TUFT1Q9NNX1 390 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 SUCLA2Q9P2R7 463 aaPredicted RBP24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 STXBP5LQ9Y2K9 1186 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 MYH15Q9Y2K3 1946 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 RALGAPA2Q2PPJ7 1873 aa24.94■■□□□ 1.58
PTCHD3P2-201ENST00000424937 LAD1O00515 517 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ENPP3O14638 875 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 GPR182O15218 404 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 MED24O75448 989 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 SPATA31C1P0DKV0 1188 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 TAP1Q03518 808 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 EMC2Q15006 297 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 RHPN2Q8IUC4 686 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 EXOC8Q8IYI6 725 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 YME1L1Q96TA2 773 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 TMX1Q9H3N1 280 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 PRDM12Q9H4Q4 367 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 DHX33Q9H6R0 707 aaKnown RBP24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 ST3GAL5Q9UNP4 418 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 INSL6Q9Y581 213 aa24.93■■□□□ 1.58
PTCHD3P2-201ENST00000424937 CHD7Q9P2D1 2997 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms