RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 PLCB3Q01970 1234 aa18.35■□□□□ 0.53
PUDP-203ENST00000424830 KIZQ2M2Z5 673 aa18.35■□□□□ 0.53
PUDP-203ENST00000424830 LLGL2Q6P1M3 1020 aa18.35■□□□□ 0.53
PUDP-203ENST00000424830 PDXDC2PQ6P474 469 aa18.35■□□□□ 0.53
PUDP-203ENST00000424830 ABHD15Q6UXT9 468 aa18.35■□□□□ 0.53
PUDP-203ENST00000424830 CCDC60Q8IWA6 550 aaPredicted RBP18.35■□□□□ 0.53
PUDP-203ENST00000424830 RASGRP4Q8TDF6 673 aa18.35■□□□□ 0.53
PUDP-203ENST00000424830 ATOH1Q92858 354 aaPredicted RBP18.35■□□□□ 0.53
PUDP-203ENST00000424830 OSMRQ99650 979 aa18.35■□□□□ 0.53
PUDP-203ENST00000424830 ELAC1Q9H777 363 aaKnown RBP18.35■□□□□ 0.53
PUDP-203ENST00000424830 NGRNQ9NPE2 291 aaKnown RBP18.35■□□□□ 0.53
PUDP-203ENST00000424830 NR2E1Q9Y466 385 aa18.35■□□□□ 0.53
PUDP-203ENST00000424830 hCG_1984214I3L0E3 225 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 CCNE2O96020 404 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 HOXB8P17481 243 aaPredicted RBP18.34■□□□□ 0.53
PUDP-203ENST00000424830 SREBF1P36956 1147 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 APOBRQ0VD83 1088 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 AP3B2Q13367 1082 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 MIS18BP1Q6P0N0 1132 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 CKAP2LQ8IYA6 745 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 ABI1Q8IZP0 508 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 ZNF713Q8N859 430 aaPredicted RBP18.34■□□□□ 0.53
PUDP-203ENST00000424830 PPP1R16BQ96T49 567 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 LRRC2Q9BYS8 371 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 TMEM117Q9H0C3 514 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 GLT8D2Q9H1C3 349 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 S1PR5Q9H228 398 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 CWH43Q9H720 699 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 FAM86C1Q9NVL1 165 aa18.34■□□□□ 0.53
PUDP-203ENST00000424830 RBM28Q9NW13 759 aaKnown RBP18.34■□□□□ 0.53
PUDP-203ENST00000424830 MYH9P35579 1960 aaKnown RBP18.34■□□□□ 0.53
PUDP-203ENST00000424830 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 SP100P23497 879 aaPredicted RBP18.33■□□□□ 0.53
PUDP-203ENST00000424830 NUBP1P53384 320 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 KRT17Q04695 432 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 KCNC3Q14003 757 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 TYW1BQ6NUM6 668 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 NIPA1Q7RTP0 329 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 SGMS1Q86VZ5 419 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 FAM228AQ86W67 206 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 LRRC43Q8N309 656 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 METTL13Q8N6R0 699 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 APOL5Q9BWW9 433 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 TSHZ2Q9NRE2 1034 aa18.33■□□□□ 0.53
PUDP-203ENST00000424830 ZBTB42B2RXF5 422 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 SLC27A2O14975 620 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 C22orf31O95567 290 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 FAM189BP81408 668 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 TPRNQ4KMQ1 711 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 CES5AQ6NT32 575 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 SWSAP1Q6NVH7 229 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 SYCE2Q6PIF2 218 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 KCNT2Q6UVM3 1135 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 PLA2G4DQ86XP0 818 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 BBXQ8WY36 941 aaPredicted RBP18.32■□□□□ 0.52
PUDP-203ENST00000424830 CASP10Q92851 521 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 ZNF558Q96NG5 402 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 NECTIN4Q96NY8 510 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 TCEAL9Q9UHQ7 104 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 CEP131Q9UPN4 1083 aa18.32■□□□□ 0.52
PUDP-203ENST00000424830 SMCO2A6NFE2 343 aa18.31■□□□□ 0.52
PUDP-203ENST00000424830 HIDE1A8MVS5 230 aa18.31■□□□□ 0.52
PUDP-203ENST00000424830 VTNP04004 478 aa18.31■□□□□ 0.52
PUDP-203ENST00000424830 ZSCAN20P17040 1043 aaPredicted RBP18.31■□□□□ 0.52
PUDP-203ENST00000424830 MTMR3Q13615 1198 aa18.31■□□□□ 0.52
PUDP-203ENST00000424830 UBALD2Q8IYN6 164 aa18.31■□□□□ 0.52
PUDP-203ENST00000424830 RIPOR3Q96MK2 946 aa18.31■□□□□ 0.52
PUDP-203ENST00000424830 LSG1Q9H089 658 aaKnown RBP18.31■□□□□ 0.52
PUDP-203ENST00000424830 DMDP11532 3685 aa18.31■□□□□ 0.52
PUDP-203ENST00000424830 SPTBN4Q9H254 2564 aa18.31■□□□□ 0.52
PUDP-203ENST00000424830 IPO5O00410 1097 aaKnown RBP18.3■□□□□ 0.52
PUDP-203ENST00000424830 GPR32O75388 356 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 COL9A3Q14050 684 aaPredicted RBP18.3■□□□□ 0.52
PUDP-203ENST00000424830 DSC3Q14574 896 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
PUDP-203ENST00000424830 RTN1Q16799 776 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 CASD1Q96PB1 797 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 BARHL2Q9NY43 387 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 SPG21Q9NZD8 308 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 SORCS3Q9UPU3 1222 aa18.3■□□□□ 0.52
PUDP-203ENST00000424830 FAM86B1E9PN63 330 aa18.29■□□□□ 0.52
PUDP-203ENST00000424830 H0Y858 1186 aa18.29■□□□□ 0.52
PUDP-203ENST00000424830 MAGEB2O15479 319 aa18.29■□□□□ 0.52
PUDP-203ENST00000424830 FAM86B2P0C5J1 330 aa18.29■□□□□ 0.52
PUDP-203ENST00000424830 ATP4AP20648 1035 aa18.29■□□□□ 0.52
PUDP-203ENST00000424830 TMOD1P28289 359 aa18.29■□□□□ 0.52
PUDP-203ENST00000424830 CLK2P49760 499 aaKnown RBP18.29■□□□□ 0.52
PUDP-203ENST00000424830 SETQ01105 290 aaPredicted RBP18.29■□□□□ 0.52
PUDP-203ENST00000424830 ITIH3Q06033 890 aa18.29■□□□□ 0.52
PUDP-203ENST00000424830 BMS1Q14692 1282 aaKnown RBP18.29■□□□□ 0.52
PUDP-203ENST00000424830 ZNF746Q6NUN9 644 aaPredicted RBP18.29■□□□□ 0.52
PUDP-203ENST00000424830 LRRC55Q6ZSA7 311 aa18.29■□□□□ 0.52
PUDP-203ENST00000424830 TRMT1LQ7Z2T5 733 aaKnown RBP18.29■□□□□ 0.52
PUDP-203ENST00000424830 SMAP1Q8IYB5 467 aaPredicted RBP18.29■□□□□ 0.52
PUDP-203ENST00000424830 ZNF710Q8N1W2 664 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms