RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 MRPS6P82932 125 aaKnown RBP28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 TMEM62Q0P6H9 643 aa28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 DEFB128Q7Z7B8 93 aa28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 KIAA0319LQ8IZA0 1049 aa28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 KCNG4Q8TDN1 519 aa28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 IL23AQ9NPF7 189 aa28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 TSHZ2Q9NRE2 1034 aa28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 DBR1Q9UK59 544 aaKnown RBP28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 DNM3Q9UQ16 869 aa28.33■■■□□ 2.13
TSPAN3-203ENST00000424443 EVPLQ92817 2033 aa28.32■■■□□ 2.12
TSPAN3-203ENST00000424443 TANC1Q9C0D5 1861 aa28.32■■■□□ 2.12
TSPAN3-203ENST00000424443 DDIT3P35638 169 aa28.32■■■□□ 2.12
TSPAN3-203ENST00000424443 TXLNAP40222 546 aa28.32■■■□□ 2.12
TSPAN3-203ENST00000424443 ECM1Q16610 540 aa28.32■■■□□ 2.12
TSPAN3-203ENST00000424443 ZNF579Q8NAF0 562 aaKnown RBP28.32■■■□□ 2.12
TSPAN3-203ENST00000424443 CEP89Q96ST8 783 aa28.32■■■□□ 2.12
TSPAN3-203ENST00000424443 MMTAG2Q9BU76 263 aaKnown RBP28.32■■■□□ 2.12
TSPAN3-203ENST00000424443 ARHGEF35A5YM69 484 aa28.31■■■□□ 2.12
TSPAN3-203ENST00000424443 SLC26A4O43511 780 aa28.31■■■□□ 2.12
TSPAN3-203ENST00000424443 PFKMP08237 780 aa28.31■■■□□ 2.12
TSPAN3-203ENST00000424443 CLIC6Q96NY7 704 aa28.31■■■□□ 2.12
TSPAN3-203ENST00000424443 BMP2KQ9NSY1 1161 aaPredicted RBP28.31■■■□□ 2.12
TSPAN3-203ENST00000424443 CIZ1Q9ULV3 898 aaPredicted RBP28.31■■■□□ 2.12
TSPAN3-203ENST00000424443 CDY2AQ9Y6F7 541 aa28.31■■■□□ 2.12
TSPAN3-203ENST00000424443 GAS2O43903 313 aaKnown RBP28.3■■■□□ 2.12
TSPAN3-203ENST00000424443 DGAT1O75907 488 aa28.3■■■□□ 2.12
TSPAN3-203ENST00000424443 FAM26DQ5JW98 314 aa28.3■■■□□ 2.12
TSPAN3-203ENST00000424443 KCTD17Q8N5Z5 321 aa28.3■■■□□ 2.12
TSPAN3-203ENST00000424443 MTRQ99707 1265 aa28.3■■■□□ 2.12
TSPAN3-203ENST00000424443 DHX33Q9H6R0 707 aaKnown RBP28.3■■■□□ 2.12
TSPAN3-203ENST00000424443 GINS2Q9Y248 185 aa28.3■■■□□ 2.12
TSPAN3-203ENST00000424443 TRPV2Q9Y5S1 764 aa28.3■■■□□ 2.12
TSPAN3-203ENST00000424443 IGKV6-21A0A0C4DH24 114 aa28.29■■■□□ 2.12
TSPAN3-203ENST00000424443 VTNP04004 478 aa28.29■■■□□ 2.12
TSPAN3-203ENST00000424443 ACRP10323 421 aa28.29■■■□□ 2.12
TSPAN3-203ENST00000424443 BMP8BP34820 402 aa28.29■■■□□ 2.12
TSPAN3-203ENST00000424443 EMC2Q15006 297 aa28.29■■■□□ 2.12
TSPAN3-203ENST00000424443 SPECC1Q5M775 1068 aa28.29■■■□□ 2.12
TSPAN3-203ENST00000424443 PSRC1Q6PGN9 363 aaPredicted RBP28.29■■■□□ 2.12
TSPAN3-203ENST00000424443 PLIN2Q99541 437 aa28.29■■■□□ 2.12
TSPAN3-203ENST00000424443 CHRNA1P02708 482 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 ME1P48163 572 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 HYIQ5T013 277 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 TRAF7Q6Q0C0 670 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 ZNF710Q8N1W2 664 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 LINC01465Q8N7H1 131 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 TCP11Q8WWU5 503 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 SCLT1Q96NL6 688 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 CELF4Q9BZC1 486 aaKnown RBP28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 BHMT2Q9H2M3 363 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 ATP6V0A4Q9HBG4 840 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 CCDC39Q9UFE4 941 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 ARID2Q68CP9 1835 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 USO1O60763 962 aaKnown RBP28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 MGAT3Q09327 533 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 SYMPKQ92797 1274 aaKnown RBP28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 SPATA32Q96LK8 384 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 PPP1R16BQ96T49 567 aa28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 SUCLA2Q9P2R7 463 aaPredicted RBP28.28■■■□□ 2.12
TSPAN3-203ENST00000424443 SCN5AQ14524 2016 aa28.27■■■□□ 2.12
TSPAN3-203ENST00000424443 E9PMD0 336 aa28.27■■■□□ 2.12
TSPAN3-203ENST00000424443 CUTAO60888 179 aa28.27■■■□□ 2.12
TSPAN3-203ENST00000424443 EYA4O95677 639 aa28.27■■■□□ 2.12
TSPAN3-203ENST00000424443 CDC42EP1Q00587 391 aa28.27■■■□□ 2.12
TSPAN3-203ENST00000424443 EPSTI1Q96J88 318 aa28.27■■■□□ 2.12
TSPAN3-203ENST00000424443 CCSER1Q9C0I3 900 aa28.27■■■□□ 2.12
TSPAN3-203ENST00000424443 RCOR1Q9UKL0 485 aa28.27■■■□□ 2.12
TSPAN3-203ENST00000424443 NBNO60934 754 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 FGBP02675 491 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 ACTN1P12814 892 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 EPHB4P54760 987 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 NLRP11P59045 1033 aaKnown RBP28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 GRB10Q13322 594 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 KARSQ15046 597 aaKnown RBP28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 KIZQ2M2Z5 673 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 RHPN2Q8IUC4 686 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 PSPC1Q8WXF1 523 aaKnown RBP28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 TMEM143Q96AN5 459 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 PNMA5Q96PV4 448 aa28.26■■■□□ 2.11
TSPAN3-203ENST00000424443 DRP2Q13474 957 aa28.25■■■□□ 2.11
TSPAN3-203ENST00000424443 MBTPS1Q14703 1052 aa28.25■■■□□ 2.11
TSPAN3-203ENST00000424443 PADI6Q6TGC4 694 aa28.25■■■□□ 2.11
TSPAN3-203ENST00000424443 ZNF365Q70YC5 407 aa28.25■■■□□ 2.11
TSPAN3-203ENST00000424443 MCPH1Q8NEM0 835 aa28.25■■■□□ 2.11
TSPAN3-203ENST00000424443 NLRP7Q8WX94 980 aa28.25■■■□□ 2.11
TSPAN3-203ENST00000424443 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.25■■■□□ 2.112e-7■■■■□ 20.1
TSPAN3-203ENST00000424443 SCAND2PQ9GZW5 306 aaPredicted RBP28.25■■■□□ 2.11
TSPAN3-203ENST00000424443 LOXHD1Q8IVV2 1947 aa28.25■■■□□ 2.11
TSPAN3-203ENST00000424443 CXCL10P02778 98 aa28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 SSBP05455 408 aaKnown RBP eCLIP28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 GHRP10912 638 aa28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 MKRN4PQ13434 485 aaPredicted RBP28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 TMEM119Q4V9L6 283 aa28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 TMEM240Q5SV17 173 aa28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 USP38Q8NB14 1042 aa28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 MTIF3Q9H2K0 278 aaKnown RBP28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 CHMP5Q9NZZ3 219 aa28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 COLQQ9Y215 455 aaPredicted RBP28.24■■■□□ 2.11
TSPAN3-203ENST00000424443 CRYBB1P53674 252 aaPredicted RBP28.23■■■□□ 2.11
TSPAN3-203ENST00000424443 FBXO47Q5MNV8 452 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms