RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 KIAA1024Q9UPX6 916 aa15.37■□□□□ 0.05
GTF3C2-204ENST00000423998 DOCK5Q9H7D0 1870 aa15.37■□□□□ 0.05
GTF3C2-204ENST00000423998 IGKV6-21A0A0C4DH24 114 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 ZBTB42B2RXF5 422 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 BRD1O95696 1058 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 SPATA31C1P0DKV0 1188 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 RARRES1P49788 294 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 CEBPZQ03701 1054 aaKnown RBP15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 POU5F1BQ06416 359 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 DEFB128Q7Z7B8 93 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 CABP7Q86V35 215 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 ZNF579Q8NAF0 562 aaKnown RBP15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 PPP1R13LQ8WUF5 828 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 TRAPPC12Q8WVT3 735 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 HERVK_113Q902F9 699 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 DHX38Q92620 1227 aaKnown RBP15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 SCLYQ96I15 445 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 RNPC3Q96LT9 517 aaKnown RBP15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 LRRC27Q9C0I9 530 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 DHX33Q9H6R0 707 aaKnown RBP15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 SUCLA2Q9P2R7 463 aaPredicted RBP15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 CLIC4Q9Y696 253 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 PHLPP2Q6ZVD8 1323 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 CEP290O15078 2479 aa15.36■□□□□ 0.05
GTF3C2-204ENST00000423998 STBD1O95210 358 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 CTSHP09668 335 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 SCP2P22307 547 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 ITGB8P26012 769 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 HIC1Q14526 733 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 PPP2R5AQ15172 486 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 CSPP1Q1MSJ5 1256 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 HYIQ5T013 277 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 CCDC73Q6ZRK6 1079 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 TSHZ1Q6ZSZ6 1077 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 ZNF365Q70YC5 407 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 LINC00301Q8NCQ3 95 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 NLRP7Q8WX94 980 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 USP28Q96RU2 1077 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 IFIH1Q9BYX4 1025 aaKnown RBP15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 CCSER1Q9C0I3 900 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 DDX19AQ9NUU7 478 aaKnown RBP15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 COLQQ9Y215 455 aaPredicted RBP15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 CDY2AQ9Y6F7 541 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 SLC4A7Q9Y6M7 1214 aa15.35■□□□□ 0.05
GTF3C2-204ENST00000423998 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 CUTAO60888 179 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 MED24O75448 989 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 RPS6KA5O75582 802 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 EYA4O95677 639 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 EIF4BP23588 611 aaKnown RBP15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 ABCD1P33897 745 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 NLRP11P59045 1033 aaKnown RBP15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 PAK2Q13177 524 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 ZRSR1Q15695 479 aaKnown RBP15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 LRIT3Q3SXY7 679 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 PLEKHG4Q58EX7 1191 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 TMEM240Q5SV17 173 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 RUFY4Q6ZNE9 571 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 PIGOQ8TEQ8 1089 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 KIFAP3Q92845 792 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 CCDC34Q96HJ3 373 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 IFT74Q96LB3 600 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 SLC9A7Q96T83 725 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 C17orf75Q9HAS0 396 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 FAM13BQ9NYF5 915 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 GINS2Q9Y248 185 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 UMODL1Q5DID0 1318 aa15.34■□□□□ 0.05
GTF3C2-204ENST00000423998 ALPK3Q96L96 1907 aa15.33■□□□□ 0.05
GTF3C2-204ENST00000423998 ZBBXA8MT70 800 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 TNRC18O15417 2968 aaPredicted RBP15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 CHRNA1P02708 482 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 AMHP03971 560 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 ZSCAN20P17040 1043 aaPredicted RBP15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 CYP11B2P19099 503 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 SFPQP23246 707 aaKnown RBP eCLIP15.33■□□□□ 0.043e-7■■□□□ 13.3
GTF3C2-204ENST00000423998 MARCKSP29966 332 aaPredicted RBP15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 PHKA2P46019 1235 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 ME1P48163 572 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 NPEPPSP55786 919 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 EMC2Q15006 297 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 PTPAQ15257 358 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 FBXO47Q5MNV8 452 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 FOXD4L5Q5VV16 416 aaPredicted RBP15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 PLA2G4FQ68DD2 849 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 PADI6Q6TGC4 694 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 RHPN2Q8IUC4 686 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 FOXD4L4Q8WXT5 416 aaPredicted RBP15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 DRC1Q96MC2 740 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.33■□□□□ 0.044e-9■□□□□ 11.1
GTF3C2-204ENST00000423998 BHMT2Q9H2M3 363 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 PRO3102Q9H379 93 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 STK17AQ9UEE5 414 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 COL4A3BPQ9Y5P4 624 aa15.33■□□□□ 0.04
GTF3C2-204ENST00000423998 H0YCG3 227 aa15.32■□□□□ 0.04
GTF3C2-204ENST00000423998 ACRP10323 421 aa15.32■□□□□ 0.04
GTF3C2-204ENST00000423998 SKIP12755 728 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms