RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CDC25AP30304 524 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 CCT6AP40227 531 aaKnown RBP20.62■□□□□ 0.89
HDAC6-205ENST00000423941 RFC5P40937 340 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 GRIN1Q05586 938 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 XKR9Q5GH70 373 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 DEFB128Q7Z7B8 93 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 LINC00301Q8NCQ3 95 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 PIGOQ8TEQ8 1089 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 JPH2Q9BR39 696 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-205ENST00000423941 ADAMTS10Q9H324 1103 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 FBXO2Q9UK22 296 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-205ENST00000423941 SRPRBQ9Y5M8 271 aaKnown RBP20.62■□□□□ 0.89
HDAC6-205ENST00000423941 TRPV2Q9Y5S1 764 aa20.62■□□□□ 0.89
HDAC6-205ENST00000423941 CTSHP09668 335 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 LONP1P36776 959 aaKnown RBP20.61■□□□□ 0.89
HDAC6-205ENST00000423941 CLCN3P51790 818 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 DRP2Q13474 957 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 LPIN1Q14693 890 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 TCTN1Q2MV58 587 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 LRIT3Q3SXY7 679 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 FBXO47Q5MNV8 452 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 KRT79Q5XKE5 535 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 POTEGQ6S5H5 508 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 LRRC71Q8N4P6 559 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 METTL13Q8N6R0 699 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 USP38Q8NB14 1042 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 ZNF396Q96N95 335 aaPredicted RBP20.61■□□□□ 0.89
HDAC6-205ENST00000423941 CDHR5Q9HBB8 845 aa20.61■□□□□ 0.89
HDAC6-205ENST00000423941 A0A087WWV3 80 aa20.6■□□□□ 0.89
HDAC6-205ENST00000423941 GAS2O43903 313 aaKnown RBP20.6■□□□□ 0.89
HDAC6-205ENST00000423941 HABP4Q5JVS0 413 aaKnown RBP20.6■□□□□ 0.89
HDAC6-205ENST00000423941 CNKSR3Q6P9H4 555 aa20.6■□□□□ 0.89
HDAC6-205ENST00000423941 FAM43BQ6ZT52 329 aaPredicted RBP20.6■□□□□ 0.89
HDAC6-205ENST00000423941 SNX29Q8TEQ0 813 aa20.6■□□□□ 0.89
HDAC6-205ENST00000423941 SUGCTQ9HAC7 445 aa20.6■□□□□ 0.89
HDAC6-205ENST00000423941 XPNPEP1Q9NQW7 623 aa20.6■□□□□ 0.89
HDAC6-205ENST00000423941 TFIP11Q9UBB9 837 aaKnown RBP20.6■□□□□ 0.89
HDAC6-205ENST00000423941 MICAL3Q7RTP6 2002 aa20.6■□□□□ 0.89
HDAC6-205ENST00000423941 BAIAP3O94812 1187 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 YEATS4O95619 227 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 VTNP04004 478 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 CRYBB1P53674 252 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-205ENST00000423941 CDC42EP1Q00587 391 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 FOXD4L5Q5VV16 416 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-205ENST00000423941 DBF4BQ8NFT6 615 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 FOXD4L4Q8WXT5 416 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-205ENST00000423941 SLC7A3Q8WY07 619 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 PNMA5Q96PV4 448 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 CCSER1Q9C0I3 900 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 AGO3Q9H9G7 860 aaKnown RBP20.59■□□□□ 0.89
HDAC6-205ENST00000423941 CXXC1Q9P0U4 656 aaPredicted RBP20.59■□□□□ 0.89
HDAC6-205ENST00000423941 KIAA1024Q9UPX6 916 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 PTPRSQ13332 1948 aa20.59■□□□□ 0.89
HDAC6-205ENST00000423941 TRIOBPQ9H2D6 2365 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 ABHD14A-ACY1A0A1B0GW23 586 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 PPP6R2O75170 966 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 DGAT1O75907 488 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 MARCKSP29966 332 aaPredicted RBP20.58■□□□□ 0.89
HDAC6-205ENST00000423941 DNM2P50570 870 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 GPC3P51654 580 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 CEBPZQ03701 1054 aaKnown RBP20.58■□□□□ 0.89
HDAC6-205ENST00000423941 TMEM62Q0P6H9 643 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 GRB10Q13322 594 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 TSHZ1Q6ZSZ6 1077 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 OTOP2Q7RTS6 562 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 TMEM40Q8WWA1 233 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 MAP7D2Q96T17 732 aa20.58■□□□□ 0.89
HDAC6-205ENST00000423941 DDX19AQ9NUU7 478 aaKnown RBP20.58■□□□□ 0.89
HDAC6-205ENST00000423941 TCHHQ07283 1943 aa20.58■□□□□ 0.88
HDAC6-205ENST00000423941 RBAK-RBAKDNI3L0D1 243 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 M0QZ92 97 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 ACTN1P12814 892 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 POLGP54098 1239 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-205ENST00000423941 NLRP11P59045 1033 aaKnown RBP20.57■□□□□ 0.88
HDAC6-205ENST00000423941 EMC2Q15006 297 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 TMEM119Q4V9L6 283 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 KCNK18Q7Z418 384 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 APBB2Q92870 758 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 RNPC3Q96LT9 517 aaKnown RBP20.57■□□□□ 0.88
HDAC6-205ENST00000423941 NT5C3AQ9H0P0 336 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 CSRNP2Q9H175 543 aa20.57■□□□□ 0.88
HDAC6-205ENST00000423941 SUCLA2Q9P2R7 463 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-205ENST00000423941 ASAP2O43150 1006 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 EYA4O95677 639 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 GHRP10912 638 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 ARL2P36404 184 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 IKBKEQ14164 716 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 KIZQ2M2Z5 673 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 CABP7Q86V35 215 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 TCP11Q8WWU5 503 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 SEPT8Q92599 483 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 IFIH1Q9BYX4 1025 aaKnown RBP20.56■□□□□ 0.88
HDAC6-205ENST00000423941 RCOR1Q9UKL0 485 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 DNM3Q9UQ16 869 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 AKT3Q9Y243 479 aa20.56■□□□□ 0.88
HDAC6-205ENST00000423941 LAMA3Q16787 3333 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 SPTLC2O15270 562 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 EFCAB14O75071 495 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 CYP11B2P19099 503 aa20.55■□□□□ 0.88
HDAC6-205ENST00000423941 EIF4BP23588 611 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms