RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 UPF2Q9HAU5 1272 aaKnown RBP17.13■□□□□ 0.33
USB1-202ENST00000423271 CEP131Q9UPN4 1083 aa17.13■□□□□ 0.33
USB1-202ENST00000423271 GPR32O75388 356 aa17.12■□□□□ 0.33
USB1-202ENST00000423271 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
USB1-202ENST00000423271 SFNP31947 248 aa17.12■□□□□ 0.33
USB1-202ENST00000423271 RBM25P49756 843 aaKnown RBP17.12■□□□□ 0.33
USB1-202ENST00000423271 ANKRD1Q15327 319 aa17.12■□□□□ 0.33
USB1-202ENST00000423271 AAK1Q2M2I8 961 aa17.12■□□□□ 0.33
USB1-202ENST00000423271 LETM2Q2VYF4 491 aa17.12■□□□□ 0.33
USB1-202ENST00000423271 FAM228AQ86W67 206 aa17.12■□□□□ 0.33
USB1-202ENST00000423271 KIF2CQ99661 725 aa17.12■□□□□ 0.33
USB1-202ENST00000423271 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
USB1-202ENST00000423271 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
USB1-202ENST00000423271 ST3GAL5Q9UNP4 418 aa17.12■□□□□ 0.33
USB1-202ENST00000423271 CCDC194A0A1B0GVG4 234 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 TMEM150BA6NC51 233 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 FAM205CA6NFA0 338 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 C5orf67F2Z3F1 127 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 TNFRSF10AO00220 468 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 BMPR1AP36894 532 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 NEK4P51957 841 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 CRYBB1P53674 252 aaPredicted RBP17.11■□□□□ 0.33
USB1-202ENST00000423271 PTPROQ16827 1216 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
USB1-202ENST00000423271 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
USB1-202ENST00000423271 EFCAB12Q6NXP0 572 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 RDM1Q8NG50 284 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 CLP1Q92989 425 aaKnown RBP17.11■□□□□ 0.33
USB1-202ENST00000423271 GTF3C6Q969F1 213 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
USB1-202ENST00000423271 NRBP2Q9NSY0 501 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 AKT3Q9Y243 479 aa17.11■□□□□ 0.33
USB1-202ENST00000423271 MRPL42Q9Y6G3 142 aaKnown RBP17.11■□□□□ 0.33
USB1-202ENST00000423271 GRM6O15303 877 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 MAGEB2O15479 319 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 STBD1O95210 358 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 XBP1P17861 261 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 NLRP11P59045 1033 aaKnown RBP17.1■□□□□ 0.33
USB1-202ENST00000423271 PIK3AP1Q6ZUJ8 805 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 NEK8Q86SG6 692 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 CMTR2Q8IYT2 770 aaKnown RBP17.1■□□□□ 0.33
USB1-202ENST00000423271 MAP7D2Q96T17 732 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 ADAM2Q99965 735 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 SH2D3AQ9BRG2 576 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 UBE2ZQ9H832 354 aaPredicted RBP17.1■□□□□ 0.33
USB1-202ENST00000423271 KCNMB3Q9NPA1 279 aa17.1■□□□□ 0.33
USB1-202ENST00000423271 SEPT9Q9UHD8 586 aaPredicted RBP17.1■□□□□ 0.33
USB1-202ENST00000423271 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 EML1O00423 815 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 GPR182O15218 404 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 JAK2O60674 1132 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 CSPG5O95196 566 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 RB1P06400 928 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 SARSP49591 514 aaKnown RBP17.09■□□□□ 0.33
USB1-202ENST00000423271 ST3GAL1Q11201 340 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 NR5A1Q13285 461 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 DRP2Q13474 957 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 TARBP2Q15633 366 aaKnown RBP17.09■□□□□ 0.33
USB1-202ENST00000423271 MTERF2Q49AM1 385 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 TIGD5Q53EQ6 642 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 TCEAL5Q5H9L2 206 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 BANK1Q8NDB2 785 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 NSUN7Q8NE18 718 aaKnown RBP17.09■□□□□ 0.33
USB1-202ENST00000423271 TBC1D32Q96NH3 1257 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 C11orf84Q9BUA3 381 aaPredicted RBP17.09■□□□□ 0.33
USB1-202ENST00000423271 ADAMTS10Q9H324 1103 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 VAV3Q9UKW4 847 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 LRFN2Q9ULH4 789 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 RWDD3Q9Y3V2 267 aa17.09■□□□□ 0.33
USB1-202ENST00000423271 FNDC1Q4ZHG4 1894 aaPredicted RBP17.08■□□□□ 0.33
USB1-202ENST00000423271 C9IYK1 514 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 TMOD1P28289 359 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 FOSBP53539 338 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 TBC1D8BQ0IIM8 1120 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 XKR3Q5GH77 459 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 PPP4R3AQ6IN85 833 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 WASF1Q92558 559 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 CEP89Q96ST8 783 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 RGS18Q9NS28 235 aa17.08■□□□□ 0.32
USB1-202ENST00000423271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.07■□□□□ 0.32
USB1-202ENST00000423271 CCNT1O60563 726 aaKnown RBP17.07■□□□□ 0.32
USB1-202ENST00000423271 GCFC2P16383 781 aaKnown RBP17.07■□□□□ 0.32
USB1-202ENST00000423271 KCNA5P22460 613 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 KRT2P35908 639 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 GPC3P51654 580 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 PPP2R5CQ13362 524 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 DSC3Q14574 896 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 ODR4Q5SWX8 454 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 HAS1Q92839 578 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
USB1-202ENST00000423271 NSUN3Q9H649 340 aaKnown RBP17.07■□□□□ 0.32
USB1-202ENST00000423271 ALG13Q9NP73 1137 aaKnown RBP17.07■□□□□ 0.32
USB1-202ENST00000423271 C1orf112Q9NSG2 853 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 HCSTQ9UBK5 93 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 PCDHB7Q9Y5E2 793 aa17.07■□□□□ 0.32
USB1-202ENST00000423271 DDX11L8A8MPP1 907 aa17.06■□□□□ 0.32
USB1-202ENST00000423271 FGFR4P22455 802 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms