RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 ANP32DO95626 131 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 AFPP02771 609 aaKnown RBP13.79□□□□□ -0.2
CTCFL-204ENST00000422869 ANXA13P27216 316 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 EPHA7Q15375 998 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 FMNL3Q8IVF7 1028 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 AGAP11Q8TF27 550 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 EYA3Q99504 573 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 GOPCQ9HD26 462 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 INTUQ9ULD6 942 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 RPTORQ8N122 1335 aa13.79□□□□□ -0.2
CTCFL-204ENST00000422869 PLA2G4BP0C869 781 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 ALADP13716 330 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 GALCP54803 685 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 SATB1Q01826 763 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 DENND2CQ68D51 928 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 GJB7Q6PEY0 223 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 FRMD5Q7Z6J6 570 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 ADAT2Q7Z6V5 191 aaKnown RBP13.78□□□□□ -0.2
CTCFL-204ENST00000422869 SLC24A3Q9HC58 644 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 INTS9Q9NV88 658 aaKnown RBP13.78□□□□□ -0.2
CTCFL-204ENST00000422869 SAMD15Q9P1V8 674 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 ARMCX3Q9UH62 379 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-204ENST00000422869 DDX25Q9UHL0 483 aaKnown RBP13.78□□□□□ -0.2
CTCFL-204ENST00000422869 AMFRQ9UKV5 643 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 KIAA1024Q9UPX6 916 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 TRPC6Q9Y210 931 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 TLDC2A0PJX2 215 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 SMIM23A6NLE4 172 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 CCDC169A6NNP5 214 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 SKAP2O75563 359 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-204ENST00000422869 CYP11B2P19099 503 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 TNNI2P48788 182 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 PLTPP55058 493 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 KCNJ2P63252 427 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 ITPK1Q13572 414 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 SLC29A2Q14542 456 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 GPBP1Q86WP2 473 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 LNX1Q8TBB1 728 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-204ENST00000422869 FBXO25Q8TCJ0 367 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 U2AF1L4Q8WU68 220 aaKnown RBP13.78□□□□□ -0.2
CTCFL-204ENST00000422869 CEP95Q96GE4 821 aa13.78□□□□□ -0.2
CTCFL-204ENST00000422869 PPP1R12AO14974 1030 aaPredicted RBP13.77□□□□□ -0.2
CTCFL-204ENST00000422869 RARAP10276 462 aa13.77□□□□□ -0.2
CTCFL-204ENST00000422869 HOXD13P35453 343 aa13.77□□□□□ -0.2
CTCFL-204ENST00000422869 ARSHQ5FYA8 562 aa13.77□□□□□ -0.2
CTCFL-204ENST00000422869 MAPKAPK5Q8IW41 473 aa13.77□□□□□ -0.2
CTCFL-204ENST00000422869 DAAM1Q9Y4D1 1078 aa13.77□□□□□ -0.2
CTCFL-204ENST00000422869 IGSF9BQ9UPX0 1349 aa13.77□□□□□ -0.2
CTCFL-204ENST00000422869 POTEB3A0JP26 581 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 POTECB2RU33 542 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 KIAA0391O15091 583 aaKnown RBP13.77□□□□□ -0.21
CTCFL-204ENST00000422869 RGS16O15492 202 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-204ENST00000422869 OAS1P00973 400 aaKnown RBP13.77□□□□□ -0.21
CTCFL-204ENST00000422869 CDK8P49336 464 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 NCALDP61601 193 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 GRIK5Q16478 980 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 UBE2SQ16763 222 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 FRMPD2Q68DX3 1309 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-204ENST00000422869 POTEBQ6S5H4 581 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 SBF2Q86WG5 1849 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 NEDD1Q8NHV4 660 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 SLC30A5Q8TAD4 765 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 SLC35G2Q8TBE7 412 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 CCHCR1Q8TD31 782 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 NT5C3AQ9H0P0 336 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 BTG4Q9NY30 223 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 NCANO14594 1321 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 KDM3AQ9Y4C1 1321 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 UBOX5O94941 541 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 VIMP08670 466 aaKnown RBP13.77□□□□□ -0.21
CTCFL-204ENST00000422869 PPATQ06203 517 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.21
CTCFL-204ENST00000422869 TNFAIP8L3Q5GJ75 292 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 SPTY2D1Q68D10 685 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-204ENST00000422869 VPS36Q86VN1 386 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 JAMLQ86YT9 394 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-204ENST00000422869 ZNF570Q96NI8 536 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 UIMC1Q96RL1 719 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 SEMA4AQ9H3S1 761 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 GRHL1Q9NZI5 618 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 PCDHA12Q9UN75 941 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 TRAF3IP3Q9Y228 551 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 SNX24Q9Y343 169 aa13.77□□□□□ -0.21
CTCFL-204ENST00000422869 SNX3O60493 162 aa13.76□□□□□ -0.21
CTCFL-204ENST00000422869 AKAP3O75969 853 aa13.76□□□□□ -0.21
CTCFL-204ENST00000422869 AGTP01019 485 aa13.76□□□□□ -0.21
CTCFL-204ENST00000422869 XRCC5P13010 732 aaKnown RBP13.76□□□□□ -0.21
CTCFL-204ENST00000422869 NQO1P15559 274 aaKnown RBP13.76□□□□□ -0.21
CTCFL-204ENST00000422869 IFNAR2P48551 515 aa13.76□□□□□ -0.21
CTCFL-204ENST00000422869 PLS1Q14651 629 aa13.76□□□□□ -0.21
CTCFL-204ENST00000422869 DCAF17Q5H9S7 520 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-204ENST00000422869 KIAA1755Q5JYT7 1200 aa13.76□□□□□ -0.21
CTCFL-204ENST00000422869 LRCH2Q5VUJ6 765 aa13.76□□□□□ -0.21
CTCFL-204ENST00000422869 C16orf86Q6ZW13 317 aa13.76□□□□□ -0.21
CTCFL-204ENST00000422869 BZW1Q7L1Q6 419 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms