RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 NME8Q8N427 588 aa9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 NSUN7Q8NE18 718 aaKnown RBP9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 ADAMTS19Q8TE59 1207 aa9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 ATP8B4Q8TF62 1192 aa9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 PTCD2Q8WV60 388 aaKnown RBP9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 TNFRSF25Q93038 417 aa9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 ZNF302Q9NR11 478 aa9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 TRPV2Q9Y5S1 764 aa9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 SQORQ9Y6N5 450 aa9.28□□□□□ -0.92
TRIM43CP-201ENST00000422468 ATG2AQ2TAZ0 1938 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 KIAA1671Q9BY89 1806 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 TNFRSF10AO00220 468 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 CPLX1O14810 134 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 PSAPP07602 524 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 BMP1P13497 986 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 KLRC1P26715 233 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 CD52P31358 61 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 USP11P51784 963 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 NEK4P51957 841 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 NLRP5P59047 1200 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 KRT76Q01546 638 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 TMEM62Q0P6H9 643 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 ZNF484Q5JVG2 852 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 MAMSTRQ6ZN01 415 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 FAM43BQ6ZT52 329 aaPredicted RBP9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 HLA-CQ95604 372 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 GTF3C6Q969F1 213 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 FTHL17Q9BXU8 183 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 CELF4Q9BZC1 486 aaKnown RBP9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 AGO3Q9H9G7 860 aaKnown RBP9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 CHMP5Q9NZZ3 219 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 TCEAL9Q9UHQ7 104 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 KCNJ14Q9UNX9 436 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 MAFBQ9Y5Q3 323 aaPredicted RBP9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 IGSF9BQ9UPX0 1349 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 KDM3AQ9Y4C1 1321 aa9.27□□□□□ -0.93
TRIM43CP-201ENST00000422468 ZBTB42B2RXF5 422 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 H3BNC9 293 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 DEXIO95424 95 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 ATP4AP20648 1035 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 PAK2Q13177 524 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 PTPROQ16827 1216 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 CPLX2Q6PUV4 134 aaKnown RBP9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 TMEM192Q8IY95 271 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 CKAP2LQ8IYA6 745 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 KIAA0319LQ8IZA0 1049 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 FAM177A1Q8N128 213 aaPredicted RBP9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 FIBCD1Q8N539 461 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 SNX21Q969T3 373 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 MRPL38Q96DV4 380 aaKnown RBP9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 UHRF1Q96T88 793 aaPredicted RBP9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 C22orf23Q9BZE7 217 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 RC3H2Q9HBD1 1191 aaKnown RBP9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 PADI3Q9ULW8 664 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 PCDHA4Q9UN74 947 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 PCDHA10Q9Y5I2 948 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 ADGRA3Q8IWK6 1321 aa9.26□□□□□ -0.93
TRIM43CP-201ENST00000422468 WDR64B1ANS9 1081 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 MSH4O15457 936 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 DGKIO75912 1065 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 KCNQ1P51787 676 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 GPM6BQ13491 265 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 GALNT17Q6IS24 598 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 RTN4RL1Q86UN2 441 aaPredicted RBP9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 BLIDQ8IZY5 108 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 CRIPAKQ8N1N5 446 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 DAGLBQ8NCG7 672 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 TBCKQ8TEA7 893 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 LINC01599Q8WXQ3 324 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 SLC5A5Q92911 643 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 CLP1Q92989 425 aaKnown RBP9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 ZNF689Q96CS4 500 aaPredicted RBP9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 FAM167AQ96KS9 214 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 RIT2Q99578 217 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 GABBR1Q9UBS5 961 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 RWDD3Q9Y3V2 267 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 SAMM50Q9Y512 469 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 FNDC1Q4ZHG4 1894 aaPredicted RBP9.25□□□□□ -0.93
TRIM43CP-201ENST00000422468 CYP3A7-CYP3A51PA0A087WV96 503 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 C5orf67F2Z3F1 127 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 MAGEB2O15479 319 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 GAS7O60861 476 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 CDKL5O76039 1030 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 TDP2O95551 362 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 C22orf31O95567 290 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 RB1P06400 928 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 STAG3L1P0CL83 205 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 CYP3A7P24462 503 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 CTNNB1P35222 781 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 BMPR1AP36894 532 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 JAK3P52333 1124 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 FOSBP53539 338 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 NR5A1Q13285 461 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 BTG3Q14201 252 aaPredicted RBP9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 Q4G0T1 1027 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 ODR4Q5SWX8 454 aa9.24□□□□□ -0.93
TRIM43CP-201ENST00000422468 LRCH2Q5VUJ6 765 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms