RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 ZNF200P98182 395 aaPredicted RBP13.12□□□□□ -0.31
CAST-208ENST00000421689 HIC1Q14526 733 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
CAST-208ENST00000421689 MCM6Q14566 821 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 PTGISQ16647 500 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 FAM126BQ8IXS8 530 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
CAST-208ENST00000421689 ENGASEQ8NFI3 743 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 TOX2Q96NM4 488 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 LRRC27Q9C0I9 530 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
CAST-208ENST00000421689 ATP6V0A4Q9HBG4 840 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 PCDHA2Q9Y5H9 948 aa13.12□□□□□ -0.31
CAST-208ENST00000421689 DCDC2CA8MYV0 355 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
CAST-208ENST00000421689 USO1O60763 962 aaKnown RBP13.11□□□□□ -0.31
CAST-208ENST00000421689 CD4P01730 458 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 RPLP2P05387 115 aaKnown RBP13.11□□□□□ -0.31
CAST-208ENST00000421689 CYP2C9P11712 490 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 LIG1P18858 919 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 CYP11B2P19099 503 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 TMOD1P28289 359 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 DNM2P50570 870 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 RTP1P59025 263 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 AMPD3Q01432 767 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
CAST-208ENST00000421689 EMC2Q15006 297 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 LONRF3Q496Y0 759 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 RINT1Q6NUQ1 792 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 EFCAB12Q6NXP0 572 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 TAF2Q6P1X5 1199 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 CNNM3Q8NE01 707 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 MCPH1Q8NEM0 835 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 MTRQ99707 1265 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 TRPV6Q9H1D0 765 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 SUGCTQ9HAC7 445 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 PDLIM7Q9NR12 457 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 BMP2KQ9NSY1 1161 aaPredicted RBP13.11□□□□□ -0.31
CAST-208ENST00000421689 TRMT13Q9NUP7 481 aaKnown RBP13.11□□□□□ -0.31
CAST-208ENST00000421689 SERTAD1Q9UHV2 236 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 ATP11BQ9Y2G3 1177 aa13.11□□□□□ -0.31
CAST-208ENST00000421689 SMIM35A0A1B0GVV1 85 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 ACTN4O43707 911 aaKnown RBP13.1□□□□□ -0.31
CAST-208ENST00000421689 PQBP1O60828 265 aaKnown RBP13.1□□□□□ -0.31
CAST-208ENST00000421689 NR1I2O75469 434 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 KCNA4P22459 653 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 TLE2Q04725 743 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 PTK7Q13308 1070 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 IER5Q5VY09 327 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 KRBA2Q6ZNG9 492 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 SERINC5Q86VE9 423 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 GPBP1Q86WP2 473 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 NME8Q8N427 588 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 TCP11Q8WWU5 503 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 RUSC1Q9BVN2 902 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
CAST-208ENST00000421689 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 KINO60870 393 aaKnown RBP13.09□□□□□ -0.31
CAST-208ENST00000421689 KRT18P05783 430 aaKnown RBP13.09□□□□□ -0.31
CAST-208ENST00000421689 PTMSP20962 102 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 GUCY2CP25092 1073 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 CLCN3P51790 818 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 RUFY4Q6ZNE9 571 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 LRRC71Q8N4P6 559 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 LINC01465Q8N7H1 131 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 DNAJB3Q8WWF6 145 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 STAMQ92783 540 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 ZBTB10Q96DT7 871 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 PAGE5Q96GU1 130 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 CTAGE1Q96RT6 745 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 MAP7D2Q96T17 732 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 HTATIP2Q9BUP3 242 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 FAM49AQ9H0Q0 323 aaPredicted RBP13.09□□□□□ -0.31
CAST-208ENST00000421689 XPNPEP1Q9NQW7 623 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 MYH11P35749 1972 aa13.09□□□□□ -0.31
CAST-208ENST00000421689 ALPK3Q96L96 1907 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 MYMKA6NI61 221 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 ASAP2O43150 1006 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 MBD3O95983 291 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 MYL1P05976 194 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 ARL2P36404 184 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 AFMP43652 599 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 CDC42EP1Q00587 391 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 FAAP100Q0VG06 881 aa13.08□□□□□ -0.32
CAST-208ENST00000421689 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
CAST-208ENST00000421689 BFSP2Q13515 415 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms