RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FAM26FQ5R3K3 315 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 TMEM63BQ5T3F8 832 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 CENPPQ6IPU0 288 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 EPM2AIP1Q7L775 607 aaPredicted RBP15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 DAW1Q8N136 415 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 KIAA0895Q8NCT3 520 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 AFG1LQ8WV93 481 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 CEP170P1Q96L14 293 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 FIZ1Q96SL8 496 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 JPH2Q9BR39 696 aaPredicted RBP15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 C16orf70Q9BSU1 422 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 STRA6Q9BX79 667 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 UPF3AQ9H1J1 476 aaKnown RBP15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 LARSQ9P2J5 1176 aaKnown RBP15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 MCM3APO60318 1980 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 UBE4BO95155 1302 aa15.8■□□□□ 0.12
SHMT1P1-201ENST00000419974 COL1A2P08123 1366 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 IGKV6-21A0A0C4DH24 114 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 PSMA7O14818 248 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 EIF3DO15371 548 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 TBCAO75347 108 aaKnown RBP15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 LGALS2P05162 132 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 IDEP14735 1019 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 EN2P19622 333 aaPredicted RBP15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 GJA9P57773 515 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 BRDTQ58F21 947 aaPredicted RBP15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 XKR9Q5GH70 373 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 TRPV1Q8NER1 839 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 OR6J1Q8NGC5 347 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 SPIRE2Q8WWL2 714 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 GLG1Q92896 1179 aa15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 ZNF215Q9UL58 517 aaPredicted RBP15.79■□□□□ 0.12
SHMT1P1-201ENST00000419974 A0A087WWV3 80 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 HIP1RO75146 1068 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 MAFO75444 373 aaPredicted RBP15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 F2P00734 622 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 PLS3P13797 630 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 NPEPPSP55786 919 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 SP4Q02446 784 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 CACNB2Q08289 660 aaPredicted RBP15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 PAK1Q13153 545 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 PLCB4Q15147 1175 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 ZNF484Q5JVG2 852 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 PRAMEF19Q5SWL8 479 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 UTP14CQ5TAP6 766 aaKnown RBP15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 SPATA1Q5VX52 437 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 TLK2Q86UE8 772 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 ZNF507Q8TCN5 953 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 CCDC43Q96MW1 224 aaKnown RBP15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 MED15Q96RN5 788 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 ATP6V0A4Q9HBG4 840 aa15.78■□□□□ 0.12
SHMT1P1-201ENST00000419974 NPHP3-ACAD11A0A0J9YXS1 232 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 BICDL2A1A5D9 508 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 BECN2A8MW95 431 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 ZBTB42B2RXF5 422 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 ADCY3O60266 1144 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 PPP1R37O75864 691 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 ECM2O94769 699 aaPredicted RBP15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 FAM13AO94988 1023 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 CCNE1P24864 410 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 CST5P28325 142 aaPredicted RBP15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 LRRC63Q05C16 580 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 NFIL3Q16649 462 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 PRPF38BQ5VTL8 546 aaKnown RBP15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 ISM2Q6H9L7 571 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 SARM1Q6SZW1 724 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 STXBP4Q6ZWJ1 553 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 ZNF720Q7Z2F6 126 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 MYOCDQ8IZQ8 938 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 SLC7A3Q8WY07 619 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 AP5M1Q9H0R1 490 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 SEPT9Q9UHD8 586 aaPredicted RBP15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 GDAQ9Y2T3 454 aa15.77■□□□□ 0.12
SHMT1P1-201ENST00000419974 H0YCG3 227 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 H3BRB1 525 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 HAS3O00219 553 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 MAGEB2O15479 319 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 DYNC1LI2O43237 492 aaPredicted RBP15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 MSCO60682 206 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 GJB1P08034 283 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 ZNF18P17022 549 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 ARL2P36404 184 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 SNRPFP62306 86 aaKnown RBP15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 GJC2Q5T442 439 aaPredicted RBP15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 PLA2G4FQ68DD2 849 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 LUZP1Q86V48 1076 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 SCFD1Q8WVM8 642 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 HVCN1Q96D96 273 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 HSD3B7Q9H2F3 369 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 TUT1Q9H6E5 874 aaKnown RBP15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 XPNPEP1Q9NQW7 623 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 PCDHB13Q9Y5F0 798 aa15.76■□□□□ 0.11
SHMT1P1-201ENST00000419974 LRRC10BA6NIK2 292 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 RSPH10B2B2RC85 870 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 GOLGA6L19H0YKK7 550 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 RSPH10BP0C881 870 aa15.75■□□□□ 0.11
SHMT1P1-201ENST00000419974 CCL5P13501 91 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms