RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 NYAP1Q6ZVC0 841 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 HSCBQ8IWL3 235 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 RPUSD2Q8IZ73 545 aaKnown RBP11.82□□□□□ -0.52
RFC1-203ENST00000418436 TRAPPC12Q8WVT3 735 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 FAM167AQ96KS9 214 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.82□□□□□ -0.528e-8■■□□□ 14.1
RFC1-203ENST00000418436 TTC12Q9H892 705 aaPredicted RBP11.82□□□□□ -0.52
RFC1-203ENST00000418436 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
RFC1-203ENST00000418436 SMIM35A0A1B0GVV1 85 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 CXCL10P02778 98 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 OATP04181 439 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 RPLP2P05387 115 aaKnown RBP11.81□□□□□ -0.52
RFC1-203ENST00000418436 ACRP10323 421 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 SYT1P21579 422 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 TXKP42681 527 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 PSMC5P62195 406 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 IGBP1P78318 339 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 PRKCEQ02156 737 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 MBTPS1Q14703 1052 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 LRIT3Q3SXY7 679 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 RILPL1Q5EBL4 403 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 PSRC1Q6PGN9 363 aaPredicted RBP11.81□□□□□ -0.52
RFC1-203ENST00000418436 NUDT18Q6ZVK8 323 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 CKAP2LQ8IYA6 745 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
RFC1-203ENST00000418436 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
RFC1-203ENST00000418436 NRBP2Q9NSY0 501 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 CEP131Q9UPN4 1083 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 PCDHB6Q9Y5E3 794 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 LOXHD1Q8IVV2 1947 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 TRIOBPQ9H2D6 2365 aa11.81□□□□□ -0.52
RFC1-203ENST00000418436 RSPH10B2B2RC85 870 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 NBNO60934 754 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 SLITRK3O94933 977 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 C22orf31O95567 290 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 FGBP02675 491 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 P4HBP07237 508 aaKnown RBP11.8□□□□□ -0.52
RFC1-203ENST00000418436 OR52Z1P0C646 297 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 RSPH10BP0C881 870 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 KLRC1P26715 233 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 QARSP47897 775 aaKnown RBP11.8□□□□□ -0.52
RFC1-203ENST00000418436 MGAT3Q09327 533 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 TARBP2Q15633 366 aaKnown RBP11.8□□□□□ -0.52
RFC1-203ENST00000418436 XKR3Q5GH77 459 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 NCAPH2Q6IBW4 605 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 BANK1Q8NDB2 785 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 DNAJB3Q8WWF6 145 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 HERVK_113Q902F9 699 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 ZBTB10Q96DT7 871 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 CEP89Q96ST8 783 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 HSD17B14Q9BPX1 270 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 WRAP73Q9P2S5 460 aaPredicted RBP11.8□□□□□ -0.52
RFC1-203ENST00000418436 TSR3Q9UJK0 312 aaKnown RBP11.8□□□□□ -0.52
RFC1-203ENST00000418436 ARID2Q68CP9 1835 aa11.8□□□□□ -0.52
RFC1-203ENST00000418436 LAD1O00515 517 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 MAGEB2O15479 319 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 DKC1O60832 514 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFC1-203ENST00000418436 CHRNA1P02708 482 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 ANO5Q75V66 913 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 DEFB128Q7Z7B8 93 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 RSPH3Q86UC2 560 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 C4orf19Q8IY42 314 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 NME8Q8N427 588 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 LINC01465Q8N7H1 131 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 DYDC2Q96IM9 177 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
RFC1-203ENST00000418436 RGL1Q9NZL6 768 aa11.79□□□□□ -0.52
RFC1-203ENST00000418436 PTPRSQ13332 1948 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 VPS37CA5D8V6 355 aaPredicted RBP11.78□□□□□ -0.52
RFC1-203ENST00000418436 LYPLA2O95372 231 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 CTSHP09668 335 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 PRPHP41219 470 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 TECP42680 631 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 FXR1P51114 621 aaKnown RBP eCLIP11.78□□□□□ -0.52
RFC1-203ENST00000418436 MRPS6P82932 125 aaKnown RBP11.78□□□□□ -0.52
RFC1-203ENST00000418436 PDIA5Q14554 519 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 PLEKHG4Q58EX7 1191 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 OTOP2Q7RTS6 562 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 TRMT1LQ7Z2T5 733 aaKnown RBP11.78□□□□□ -0.52
RFC1-203ENST00000418436 KIAA0319LQ8IZA0 1049 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 NEK9Q8TD19 979 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 RNPC3Q96LT9 517 aaKnown RBP11.78□□□□□ -0.52
RFC1-203ENST00000418436 LXNQ9BS40 222 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 OSBPL7Q9BZF2 842 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 FAM49AQ9H0Q0 323 aaPredicted RBP11.78□□□□□ -0.52
RFC1-203ENST00000418436 ZSWIM4Q9H7M6 989 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 KDM3AQ9Y4C1 1321 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 MYH15Q9Y2K3 1946 aa11.78□□□□□ -0.52
RFC1-203ENST00000418436 GBF1Q92538 1859 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 TMEM150BA6NC51 233 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 SOX1O00570 391 aaPredicted RBP11.77□□□□□ -0.53
RFC1-203ENST00000418436 STX6O43752 255 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 SPATA31C1P0DKV0 1188 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 ACTN1P12814 892 aa11.77□□□□□ -0.53
RFC1-203ENST00000418436 ATP2C1P98194 919 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms