RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 MTMR3Q13615 1198 aa20.44■□□□□ 0.86
VCP-202ENST00000417448 UBE2SQ16763 222 aa20.44■□□□□ 0.86
VCP-202ENST00000417448 ADSSL1Q8N142 457 aa20.44■□□□□ 0.86
VCP-202ENST00000417448 NKD2Q969F2 451 aaPredicted RBP20.44■□□□□ 0.86
VCP-202ENST00000417448 IGSF9BQ9UPX0 1349 aa20.44■□□□□ 0.86
VCP-202ENST00000417448 CACNA1BQ00975 2339 aa20.44■□□□□ 0.86
VCP-202ENST00000417448 GSTTP1A0A1W2PQM5 241 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 PFKFB2O60825 505 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 ATP9AO75110 1047 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 ARP10275 920 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 IFNAR1P17181 557 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 IBSPP21815 317 aaPredicted RBP20.43■□□□□ 0.86
VCP-202ENST00000417448 IGBP1P78318 339 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 LLGL2Q6P1M3 1020 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 UBALD2Q8IYN6 164 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 AIFM3Q96NN9 605 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 PCDHB12Q9Y5F1 795 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 SQORQ9Y6N5 450 aa20.43■□□□□ 0.86
VCP-202ENST00000417448 NCOR2Q9Y618 2525 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 FSD2A1L4K1 749 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 C2CD4DB7Z1M9 353 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 CPLX1O14810 134 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 PRPF3O43395 683 aaKnown RBP20.42■□□□□ 0.86
VCP-202ENST00000417448 CTDNEP1O95476 244 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 NAPAP54920 295 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 ANKRD1Q15327 319 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 PLPP4Q5VZY2 271 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 RASGRP4Q8TDF6 673 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 ERAP1Q9NZ08 941 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 TRPV2Q9Y5S1 764 aa20.42■□□□□ 0.86
VCP-202ENST00000417448 MGEA5O60502 916 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 CD2BP2O95400 341 aaKnown RBP20.41■□□□□ 0.86
VCP-202ENST00000417448 KCNA2P16389 499 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 SSRP1Q08945 709 aaKnown RBP20.41■□□□□ 0.86
VCP-202ENST00000417448 ST3GAL1Q11201 340 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 PAK2Q13177 524 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 PFKFB3Q16875 520 aaPredicted RBP20.41■□□□□ 0.86
VCP-202ENST00000417448 TMEM266Q2M3C6 531 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 FAM102BQ5T8I3 360 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 IER5Q5VY09 327 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 PCNX4Q63HM2 1172 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 ASTLQ6HA08 431 aaPredicted RBP20.41■□□□□ 0.86
VCP-202ENST00000417448 POMKQ9H5K3 350 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 TMEM260Q9NX78 707 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 LRFN2Q9ULH4 789 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 EPG5Q9HCE0 2579 aa20.41■□□□□ 0.86
VCP-202ENST00000417448 HIDE1A8MVS5 230 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 MEIS2O14770 477 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 INSRRP14616 1297 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 SARSP49591 514 aaKnown RBP20.4■□□□□ 0.86
VCP-202ENST00000417448 AKAP17AQ02040 695 aaKnown RBP20.4■□□□□ 0.86
VCP-202ENST00000417448 TRAF1Q13077 416 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 RABEP1Q15276 862 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 SPOUT1Q5T280 376 aaKnown RBP20.4■□□□□ 0.86
VCP-202ENST00000417448 THNSL1Q8IYQ7 743 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 COLGALT1Q8NBJ5 622 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 SMARCC2Q8TAQ2 1214 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 PGBD1Q96JS3 809 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 NR2E1Q9Y466 385 aa20.4■□□□□ 0.86
VCP-202ENST00000417448 MED19A0JLT2 244 aaPredicted RBP20.39■□□□□ 0.85
VCP-202ENST00000417448 SMCO2A6NFE2 343 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 TBKBP1A7MCY6 615 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 ASGR2P07307 311 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 SRGAP2BP0DMP2 458 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 CWF19L1Q69YN2 538 aaKnown RBP20.39■□□□□ 0.85
VCP-202ENST00000417448 PDE12Q6L8Q7 609 aaKnown RBP20.39■□□□□ 0.85
VCP-202ENST00000417448 TRAPPC12Q8WVT3 735 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 SEPT1Q8WYJ6 367 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 GLG1Q92896 1179 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 PCYT2Q99447 389 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 AAASQ9NRG9 546 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 TYW1Q9NV66 732 aaKnown RBP20.39■□□□□ 0.85
VCP-202ENST00000417448 BARHL2Q9NY43 387 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 VPS54Q9P1Q0 977 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 LIMCH1Q9UPQ0 1083 aa20.39■□□□□ 0.85
VCP-202ENST00000417448 KMT2BQ9UMN6 2715 aaPredicted RBP20.38■□□□□ 0.85
VCP-202ENST00000417448 JAK2O60674 1132 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 FOSBP53539 338 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 MCTP2Q6DN12 878 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 CCDC83Q8IWF9 413 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 GIMAP8Q8ND71 665 aaPredicted RBP20.38■□□□□ 0.85
VCP-202ENST00000417448 GTF3C6Q969F1 213 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 TCF25Q9BQ70 676 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 RNF26Q9BY78 433 aaPredicted RBP20.38■□□□□ 0.85
VCP-202ENST00000417448 CELF4Q9BZC1 486 aaKnown RBP20.38■□□□□ 0.85
VCP-202ENST00000417448 CWH43Q9H720 699 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 GJB4Q9NTQ9 266 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 PCDHB7Q9Y5E2 793 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 DENND4AQ7Z401 1863 aa20.38■□□□□ 0.85
VCP-202ENST00000417448 KDM3AQ9Y4C1 1321 aa20.37■□□□□ 0.85
VCP-202ENST00000417448 RPLP2P05387 115 aaKnown RBP20.37■□□□□ 0.85
VCP-202ENST00000417448 HOXB8P17481 243 aaPredicted RBP20.37■□□□□ 0.85
VCP-202ENST00000417448 MRPS27Q92552 414 aaKnown RBP20.37■□□□□ 0.85
VCP-202ENST00000417448 CUL5Q93034 780 aa20.37■□□□□ 0.85
VCP-202ENST00000417448 SMARCAD1Q9H4L7 1026 aa20.37■□□□□ 0.85
VCP-202ENST00000417448 PKD2L1Q9P0L9 805 aa20.37■□□□□ 0.85
VCP-202ENST00000417448 CEP250Q9BV73 2442 aa20.37■□□□□ 0.85
VCP-202ENST00000417448 RRN3P2A6NIE6 340 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms