RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TAF1DQ9H5J8 278 aaPredicted RBP12.9□□□□□ -0.34
UBR4-205ENST00000417040 HACD3Q9P035 362 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 RPAP1Q9BWH6 1393 aaPredicted RBP12.9□□□□□ -0.34
UBR4-205ENST00000417040 ERVV-2B6SEH9 535 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 PODXLO00592 558 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 MARK3P27448 753 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 AP2B1P63010 937 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 NRBF2Q96F24 287 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 ADA2Q9NZK5 511 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 DBR1Q9UK59 544 aaKnown RBP12.9□□□□□ -0.34
UBR4-205ENST00000417040 ASAP1Q9ULH1 1129 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 HEY1Q9Y5J3 304 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 SYNMO15061 1565 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 E9PMD0 336 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
UBR4-205ENST00000417040 ARL4AP40617 200 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 ALDH18A1P54886 795 aaKnown RBP12.9□□□□□ -0.34
UBR4-205ENST00000417040 PSMD2Q13200 908 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 NRBP2Q9NSY0 501 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 CNOT8Q9UFF9 292 aaKnown RBP12.9□□□□□ -0.34
UBR4-205ENST00000417040 AMACRQ9UHK6 382 aa12.9□□□□□ -0.34
UBR4-205ENST00000417040 CCZ1BP86790 482 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
UBR4-205ENST00000417040 PPP6R3Q5H9R7 873 aaPredicted RBP12.89□□□□□ -0.35
UBR4-205ENST00000417040 LONP2Q86WA8 852 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 ANKMY2Q8IV38 441 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 BHMT2Q9H2M3 363 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 TTI1O43156 1089 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 PEX3P56589 373 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 LRRC63Q05C16 580 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 HPS3Q969F9 1004 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 TMEM206Q9H813 350 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 KIF9Q9HAQ2 790 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 CD248Q9HCU0 757 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 CYTH1Q15438 398 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 E4F1Q66K89 784 aaPredicted RBP12.89□□□□□ -0.35
UBR4-205ENST00000417040 SHC4Q6S5L8 630 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 ZBED8Q8IZ13 594 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 NACC1Q96RE7 527 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 SNX25Q9H3E2 840 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 KLHL11Q9NVR0 708 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 FCER1AP12319 257 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 HSPA6P17066 643 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 SOX5P35711 763 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 GCLMP48507 274 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 PDIK1LQ8N165 341 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 KIF2BQ8N4N8 673 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 ICA1LQ8NDH6 482 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 FGFR1OP2Q9NVK5 253 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 TJP3O95049 919 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 ENO1P06733 434 aaKnown RBP12.89□□□□□ -0.35
UBR4-205ENST00000417040 SRGAP2CP0DJJ0 459 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 ARFIP2P53365 341 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 MECOMQ03112 1051 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 SFR1Q86XK3 245 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 ARMC2Q8NEN0 867 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 ATXN7L3BQ96GX2 97 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 TFR2Q9UP52 801 aa12.89□□□□□ -0.35
UBR4-205ENST00000417040 NPHP3-ACAD11A0A0J9YXS1 232 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 CHN1P15882 459 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 CHP1Q99653 195 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
UBR4-205ENST00000417040 ADGBQ8N7X0 1667 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 H0YCG3 227 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 CCDC188H7C350 402 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 NPR1P16066 1061 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 MCAMP43121 646 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 NBPF9Q3BBW0 867 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 OLFML2BQ68BL8 750 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 COG1Q8WTW3 980 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 MIS12Q9H081 205 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 EPN3Q9H201 632 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 CXorf56Q9H5V9 222 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 TRAF3IP3Q9Y228 551 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 PALM3A6NDB9 673 aaPredicted RBP12.88□□□□□ -0.35
UBR4-205ENST00000417040 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 SYCE1LA8MT33 242 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 STAT3P40763 770 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 ARPP19P56211 112 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 KCNH2Q12809 1159 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 PDIA2Q13087 525 aaKnown RBP12.88□□□□□ -0.35
UBR4-205ENST00000417040 ERICH1Q86X53 443 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 PRPF38AQ8NAV1 312 aaKnown RBP12.88□□□□□ -0.35
UBR4-205ENST00000417040 CCDC124Q96CT7 223 aaKnown RBP12.88□□□□□ -0.35
UBR4-205ENST00000417040 NCAPGQ9BPX3 1015 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 KCNG1Q9UIX4 513 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 PFDN6O15212 129 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 GPS1Q13098 491 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 FAM160B1Q5W0V3 765 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 NIM1KQ8IY84 436 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 PPM1NQ8N819 430 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.88□□□□□ -0.359e-9■■□□□ 12.9
UBR4-205ENST00000417040 NDE1Q9NXR1 346 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
UBR4-205ENST00000417040 STOML1Q9UBI4 398 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 MYL1P05976 194 aa12.88□□□□□ -0.35
UBR4-205ENST00000417040 PTPREP23469 700 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms