RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 RIC8AQ9NPQ8 531 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 FAM86C1Q9NVL1 165 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 LZTS1Q9Y250 596 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 NR2E1Q9Y466 385 aa11.41□□□□□ -0.58
MDC1-202ENST00000416571 KMT2BQ9UMN6 2715 aaPredicted RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 hCG_1984214I3L0E3 225 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 FSCN2O14926 492 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 FGFR1P11362 822 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 ZSCAN20P17040 1043 aaPredicted RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 HOXB8P17481 243 aaPredicted RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 SP100P23497 879 aaPredicted RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 CA8P35219 290 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 PPM1AP35813 382 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 CRYBB1P53674 252 aaPredicted RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 VCPP55072 806 aaKnown RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 KRT17Q04695 432 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 APOBRQ0VD83 1088 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 AP3B2Q13367 1082 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 KIZQ2M2Z5 673 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 TMEM184AQ6ZMB5 413 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 TMC7Q7Z402 723 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 CCDC60Q8IWA6 550 aaPredicted RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 METTL13Q8N6R0 699 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 ZNF713Q8N859 430 aaPredicted RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 RASGRP4Q8TDF6 673 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 TMEM40Q8WWA1 233 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 LRRC2Q9BYS8 371 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 TMEM117Q9H0C3 514 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 GLT8D2Q9H1C3 349 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 ELAC1Q9H777 363 aaKnown RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 CDHR5Q9HBB8 845 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 NGRNQ9NPE2 291 aaKnown RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 TSHZ2Q9NRE2 1034 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 RBM28Q9NW13 759 aaKnown RBP11.4□□□□□ -0.58
MDC1-202ENST00000416571 HCSTQ9UBK5 93 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 DCHS1Q96JQ0 3298 aa11.4□□□□□ -0.58
MDC1-202ENST00000416571 MYH9P35579 1960 aaKnown RBP11.39□□□□□ -0.59
MDC1-202ENST00000416571 IGKV6D-21A0A0A0MT36 114 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 SMCO2A6NFE2 343 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 MEIS1O00470 390 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 CCNE2O96020 404 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 SREBF1P36956 1147 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 PLCB3Q01970 1234 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 BMS1Q14692 1282 aaKnown RBP11.39□□□□□ -0.59
MDC1-202ENST00000416571 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 CES5AQ6NT32 575 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 SWSAP1Q6NVH7 229 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 KCNT2Q6UVM3 1135 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 ABHD15Q6UXT9 468 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 TRMT1LQ7Z2T5 733 aaKnown RBP11.39□□□□□ -0.59
MDC1-202ENST00000416571 FAM228AQ86W67 206 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 PLA2G4DQ86XP0 818 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 LRRC43Q8N309 656 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 BBXQ8WY36 941 aaPredicted RBP11.39□□□□□ -0.59
MDC1-202ENST00000416571 CASP10Q92851 521 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 ASIC4Q96FT7 647 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 ZNF558Q96NG5 402 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 MAP7D2Q96T17 732 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 CWH43Q9H720 699 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 CEP131Q9UPN4 1083 aa11.39□□□□□ -0.59
MDC1-202ENST00000416571 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 H0Y858 1186 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 IPO5O00410 1097 aaKnown RBP11.38□□□□□ -0.59
MDC1-202ENST00000416571 SLC27A2O14975 620 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 VTNP04004 478 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 TMOD1P28289 359 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 NUBP1P53384 320 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 MTMR3Q13615 1198 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 SMC1AQ14683 1233 aaKnown RBP11.38□□□□□ -0.59
MDC1-202ENST00000416571 RTN1Q16799 776 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 NIPA1Q7RTP0 329 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 SGMS1Q86VZ5 419 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 RNF169Q8NCN4 708 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 RIPOR3Q96MK2 946 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 YTHDC1Q96MU7 727 aaKnown RBP11.38□□□□□ -0.59
MDC1-202ENST00000416571 SCLT1Q96NL6 688 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 NECTIN4Q96NY8 510 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 ZNF577Q9BSK1 485 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 S1PR5Q9H228 398 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 SORCS3Q9UPU3 1222 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 AKT3Q9Y243 479 aa11.38□□□□□ -0.59
MDC1-202ENST00000416571 HIDE1A8MVS5 230 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 MAGEB2O15479 319 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 C22orf31O95567 290 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 NLRP11P59045 1033 aaKnown RBP11.37□□□□□ -0.59
MDC1-202ENST00000416571 FAM189BP81408 668 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 ITIH3Q06033 890 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 KCNC3Q14003 757 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 RNF20Q5VTR2 975 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 CREB3L3Q68CJ9 461 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 TYW1BQ6NUM6 668 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 SYCE2Q6PIF2 218 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 APOA5Q6Q788 366 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 SMAP1Q8IYB5 467 aaPredicted RBP11.37□□□□□ -0.59
MDC1-202ENST00000416571 UBALD2Q8IYN6 164 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 KREMEN2Q8NCW0 462 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 CASD1Q96PB1 797 aa11.37□□□□□ -0.59
MDC1-202ENST00000416571 LSG1Q9H089 658 aaKnown RBP11.37□□□□□ -0.59
MDC1-202ENST00000416571 TBC1D22BQ9NU19 505 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms