RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 FIBCD1Q8N539 461 aa17.06■□□□□ 0.32
UBXN4-203ENST00000416538 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
UBXN4-203ENST00000416538 CEP89Q96ST8 783 aa17.06■□□□□ 0.32
UBXN4-203ENST00000416538 HCSTQ9UBK5 93 aa17.06■□□□□ 0.32
UBXN4-203ENST00000416538 C5orf67F2Z3F1 127 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 TNFRSF10AO00220 468 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 GRM6O15303 877 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 NFX1Q12986 1120 aaKnown RBP17.05■□□□□ 0.32
UBXN4-203ENST00000416538 DRP2Q13474 957 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 NONOQ15233 471 aaKnown RBP eCLIP17.05■□□□□ 0.32
UBXN4-203ENST00000416538 TARBP2Q15633 366 aaKnown RBP17.05■□□□□ 0.32
UBXN4-203ENST00000416538 PAN2Q504Q3 1202 aaKnown RBP17.05■□□□□ 0.32
UBXN4-203ENST00000416538 CPLX2Q6PUV4 134 aaKnown RBP17.05■□□□□ 0.32
UBXN4-203ENST00000416538 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 NPAS4Q8IUM7 802 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 METTL13Q8N6R0 699 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 HLA-CQ95604 372 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 ZNF668Q96K58 619 aaPredicted RBP17.05■□□□□ 0.32
UBXN4-203ENST00000416538 FTHL17Q9BXU8 183 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 UBE2ZQ9H832 354 aaPredicted RBP17.05■□□□□ 0.32
UBXN4-203ENST00000416538 TCEAL9Q9UHQ7 104 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 VAV3Q9UKW4 847 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 COG5Q9UP83 839 aa17.05■□□□□ 0.32
UBXN4-203ENST00000416538 EML1O00423 815 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 RPS6KA5O75582 802 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 JAK3P52333 1124 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 CAMK1Q14012 370 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 BTG3Q14201 252 aaPredicted RBP17.04■□□□□ 0.32
UBXN4-203ENST00000416538 TCEAL5Q5H9L2 206 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 GALNT17Q6IS24 598 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 KRT25Q7Z3Z0 450 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 FAM177A1Q8N128 213 aaPredicted RBP17.04■□□□□ 0.32
UBXN4-203ENST00000416538 TNFRSF25Q93038 417 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 FAM167AQ96KS9 214 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 SH2D3AQ9BRG2 576 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 C22orf23Q9BZE7 217 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 ADAMTS10Q9H324 1103 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 KCNMB3Q9NPA1 279 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
UBXN4-203ENST00000416538 DDX25Q9UHL0 483 aaKnown RBP17.04■□□□□ 0.32
UBXN4-203ENST00000416538 ST3GAL5Q9UNP4 418 aa17.04■□□□□ 0.32
UBXN4-203ENST00000416538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.03■□□□□ 0.32
UBXN4-203ENST00000416538 C9IYK1 514 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 WNT7AO00755 349 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 CDKL5O76039 1030 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 CSPG5O95196 566 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 IBSPP21815 317 aaPredicted RBP17.03■□□□□ 0.32
UBXN4-203ENST00000416538 SFNP31947 248 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 BMPR1AP36894 532 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 NR5A1Q13285 461 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 DSC3Q14574 896 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 COL19A1Q14993 1142 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 LETM2Q2VYF4 491 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 EFCAB12Q6NXP0 572 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 MIER3Q7Z3K6 550 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 CMTR2Q8IYT2 770 aaKnown RBP17.03■□□□□ 0.32
UBXN4-203ENST00000416538 NSUN7Q8NE18 718 aaKnown RBP17.03■□□□□ 0.32
UBXN4-203ENST00000416538 ADAM2Q99965 735 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 WRAP73Q9P2S5 460 aaPredicted RBP17.03■□□□□ 0.32
UBXN4-203ENST00000416538 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
UBXN4-203ENST00000416538 JAK2O60674 1132 aa17.02■□□□□ 0.32
UBXN4-203ENST00000416538 DNAJB1P25685 340 aa17.02■□□□□ 0.32
UBXN4-203ENST00000416538 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
UBXN4-203ENST00000416538 CRYBB1P53674 252 aaPredicted RBP17.02■□□□□ 0.32
UBXN4-203ENST00000416538 NLRP11P59045 1033 aaKnown RBP17.02■□□□□ 0.32
UBXN4-203ENST00000416538 TIGD5Q53EQ6 642 aa17.02■□□□□ 0.32
UBXN4-203ENST00000416538 PIK3AP1Q6ZUJ8 805 aa17.02■□□□□ 0.32
UBXN4-203ENST00000416538 BANK1Q8NDB2 785 aa17.02■□□□□ 0.32
UBXN4-203ENST00000416538 RDM1Q8NG50 284 aa17.02■□□□□ 0.32
UBXN4-203ENST00000416538 HAS1Q92839 578 aa17.02■□□□□ 0.32
UBXN4-203ENST00000416538 RNF19AQ9NV58 838 aa17.02■□□□□ 0.32
UBXN4-203ENST00000416538 SEPT9Q9UHD8 586 aaPredicted RBP17.02■□□□□ 0.32
UBXN4-203ENST00000416538 CCDC194A0A1B0GVG4 234 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 MAGEB2O15479 319 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 KCNA5P22460 613 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 GPC3P51654 580 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 AAK1Q2M2I8 961 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 MTERF2Q49AM1 385 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 NEK8Q86SG6 692 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 C11orf84Q9BUA3 381 aaPredicted RBP17.01■□□□□ 0.31
UBXN4-203ENST00000416538 ALG13Q9NP73 1137 aaKnown RBP17.01■□□□□ 0.31
UBXN4-203ENST00000416538 RGS18Q9NS28 235 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 AKT3Q9Y243 479 aa17.01■□□□□ 0.31
UBXN4-203ENST00000416538 MMP1P03956 469 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 ITGB1P05556 798 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 RB1P06400 928 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 FGFR1P11362 822 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 FGFR4P22455 802 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
UBXN4-203ENST00000416538 FOSBP53539 338 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 SPIRE1Q08AE8 756 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 PPP2R5CQ13362 524 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 PTPROQ16827 1216 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 FAM102BQ5T8I3 360 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 PLA2G4FQ68DD2 849 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 ANO5Q75V66 913 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 IL27Q8NEV9 243 aa17■□□□□ 0.31
UBXN4-203ENST00000416538 GADD45GIP1Q8TAE8 222 aaPredicted RBP17■□□□□ 0.31
UBXN4-203ENST00000416538 KHSRPQ92945 711 aaKnown RBP eCLIP17■□□□□ 0.311e-9■■□□□ 14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms