RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 METTL14Q9HCE5 456 aaKnown RBP16.05■□□□□ 0.16
LINC00475-202ENST00000416438 NENFQ9UMX5 172 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 PGRMC1O00264 195 aaKnown RBP16.05■□□□□ 0.16
LINC00475-202ENST00000416438 SLC26A4O43511 780 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 GH2P01242 217 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 LSP1P33241 339 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 BMT2Q1RMZ1 405 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 KDM7AQ6ZMT4 941 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 TADA2BQ86TJ2 420 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 FAM186BQ8IYM0 893 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 BORCS6Q96GS4 357 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 ATP6V1G3Q96LB4 118 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC00475-202ENST00000416438 WDR18Q9BV38 432 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 NR2E1Q9Y466 385 aa16.05■□□□□ 0.16
LINC00475-202ENST00000416438 A0A087WUV0 522 aaPredicted RBP16.04■□□□□ 0.16
LINC00475-202ENST00000416438 DAPK3O43293 454 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 SLITRK3O94933 977 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 FAM13AO94988 1023 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 IFI16Q16666 785 aaKnown RBP16.04■□□□□ 0.16
LINC00475-202ENST00000416438 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
LINC00475-202ENST00000416438 ADAT2Q7Z6V5 191 aaKnown RBP16.04■□□□□ 0.16
LINC00475-202ENST00000416438 NT5DC3Q86UY8 548 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 CD302Q8IX05 232 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 RDH13Q8NBN7 331 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 STXBP5LQ9Y2K9 1186 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 ZMYM2Q9UBW7 1377 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 C10orf71Q711Q0 1435 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 TTI1O43156 1089 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 CFBP00751 764 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 FOSP01100 380 aaPredicted RBP16.04■□□□□ 0.16
LINC00475-202ENST00000416438 TRIM49P0CI25 452 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 TRIM49CP0CI26 452 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 BMP3P12645 472 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 CIITAP33076 1130 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 CYP2J2P51589 502 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 CBWD6Q4V339 395 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 CBWD3Q5JTY5 395 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 CBWD5Q5RIA9 395 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 TMEM179Q6ZVK1 233 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
LINC00475-202ENST00000416438 TDRD3Q9H7E2 651 aaKnown RBP16.04■□□□□ 0.16
LINC00475-202ENST00000416438 IGSF9BQ9UPX0 1349 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 IGLV3-22A0A075B6J6 115 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 CES2O00748 559 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 NPR1P16066 1061 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 COPB2P35606 906 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 PLS1Q14651 629 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 DRAP1Q14919 205 aaPredicted RBP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 OTOP1Q7RTM1 612 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 SLFN11Q7Z7L1 901 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 VPS36Q86VN1 386 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 POLR3CQ9BUI4 534 aaPredicted RBP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 TRIM31Q9BZY9 425 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 FAM107BQ9H098 131 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 DPH5Q9H2P9 285 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 DNAJC12Q9UKB3 198 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 PRR12Q9ULL5 1215 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 BUB1BO60566 1050 aaPredicted RBP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 HSPA1LP34931 641 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 STAT1P42224 750 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 ECE1P42892 770 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 ITGB3BPQ13352 177 aaPredicted RBP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 C1orf186Q6ZWK4 172 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 KRT27Q7Z3Y8 459 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 COL23A1Q86Y22 540 aaPredicted RBP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 SLC35G2Q8TBE7 412 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 UBLCP1Q8WVY7 318 aaPredicted RBP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 TMBIM4Q9HC24 238 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 BCCIPQ9P287 314 aaKnown RBP eCLIP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 WRAP73Q9P2S5 460 aaPredicted RBP16.03■□□□□ 0.16
LINC00475-202ENST00000416438 PPP1R9AQ9ULJ8 1098 aa16.03■□□□□ 0.16
LINC00475-202ENST00000416438 GREB1LQ9C091 1923 aaPredicted RBP16.02■□□□□ 0.16
LINC00475-202ENST00000416438 H0YGN5 161 aa16.02■□□□□ 0.16
LINC00475-202ENST00000416438 CTNNA1P35221 906 aaKnown RBP16.02■□□□□ 0.16
LINC00475-202ENST00000416438 PSMC2P35998 433 aaKnown RBP16.02■□□□□ 0.16
LINC00475-202ENST00000416438 MMP14P50281 582 aa16.02■□□□□ 0.16
LINC00475-202ENST00000416438 ARHGAP44Q17R89 818 aa16.02■□□□□ 0.16
LINC00475-202ENST00000416438 PALB2Q86YC2 1186 aa16.02■□□□□ 0.16
LINC00475-202ENST00000416438 LRRC4CQ9HCJ2 640 aa16.02■□□□□ 0.16
LINC00475-202ENST00000416438 SEPT11Q9NVA2 429 aaKnown RBP16.02■□□□□ 0.16
LINC00475-202ENST00000416438 TAS2R14Q9NYV8 317 aa16.02■□□□□ 0.16
LINC00475-202ENST00000416438 FBXL5Q9UKA1 691 aa16.02■□□□□ 0.16
LINC00475-202ENST00000416438 NFS1Q9Y697 457 aa16.02■□□□□ 0.16
LINC00475-202ENST00000416438 SMCHD1A6NHR9 2005 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 F8VZ95 297 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 LRRN2O75325 713 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 FERP16591 822 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 SOX5P35711 763 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 FMO5P49326 533 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.15
LINC00475-202ENST00000416438 KIAA1755Q5JYT7 1200 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 LRCH2Q5VUJ6 765 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 MSL1Q68DK7 614 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 CCDC174Q6PII3 467 aa16.02■□□□□ 0.15
LINC00475-202ENST00000416438 BANK1Q8NDB2 785 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms