RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 USP14P54578 494 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 PAK1Q13153 545 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 TOB2Q14106 344 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 STILQ15468 1287 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 RABL3Q5HYI8 236 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 ZNF362Q5T0B9 420 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 TMEM200BQ69YZ2 307 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 MRM1Q6IN84 353 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 MFSD5Q6N075 450 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 NSMFQ6X4W1 530 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 HDGFL2Q7Z4V5 671 aaPredicted RBP4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 MTDHQ86UE4 582 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 GFM2Q969S9 779 aaKnown RBP4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 RCAN3Q9UKA8 241 aa4.83□□□□□ -1.64
TRAPPC13-203ENST00000415825 ZBTB7CA1YPR0 619 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 KRTAP29-1A8MX34 341 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 AQP7O14520 342 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 PABPC1P11940 636 aaKnown RBP4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 KRT15P19012 456 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 CRY1Q16526 586 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 TIGD2Q4W5G0 525 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 KLHDC10Q6PID8 442 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 VRK3Q8IV63 474 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 HIPK4Q8NE63 616 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 SUPT20HQ8NEM7 779 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 THAP3Q8WTV1 239 aaPredicted RBP4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 ARL8AQ96BM9 186 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 TCF25Q9BQ70 676 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 SLC6A15Q9H2J7 730 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 TOR3AQ9H497 397 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 FZD1Q9UP38 647 aa4.82□□□□□ -1.64
TRAPPC13-203ENST00000415825 FAM90A27PA6NNH2 459 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 PROZP22891 400 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 TAP1Q03518 808 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 HECTD2Q5U5R9 776 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 KRT40Q6A162 431 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 FAM111BQ6SJ93 734 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 GAREM2Q75VX8 874 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 LRRC47Q8N1G4 583 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 ATXN2LQ8WWM7 1075 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 FBXW5Q969U6 566 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 SLC7A6OSQ96CW6 309 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 AGO3Q9H9G7 860 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 UCKL1Q9NWZ5 548 aa4.81□□□□□ -1.64
TRAPPC13-203ENST00000415825 XDHP47989 1333 aa4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 TRAV20A0A0B4J274 112 aa4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 ZNF37AP17032 561 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 APEX1P27695 318 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 KRTAP10-11P60412 298 aa4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 ATP2C1P98194 919 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 ADAM15Q13444 863 aa4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 FAM47CQ5HY64 1035 aa4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 LRRC55Q6ZSA7 311 aa4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 RD3Q7Z3Z2 195 aa4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 IPO9Q96P70 1041 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 HECAQ9UBI9 543 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-203ENST00000415825 SPATA31A6Q5VVP1 1343 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 MC4RP32245 332 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 ETFBP38117 255 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 AVPR1BP47901 424 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 BPIFB4P59827 614 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 FKBP15Q5T1M5 1219 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 PTRH1Q86Y79 214 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 MB21D1Q8N884 522 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 PGBD4Q96DM1 585 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 RPL10LQ96L21 214 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 RSAD1Q9HA92 442 aa4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 SAE1Q9UBE0 346 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC13-203ENST00000415825 WNT9AO14904 365 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 KIAA0355O15063 1070 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 GYPEP15421 78 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 GNAT2P19087 354 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 MFAP1P55081 439 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 KANK2Q63ZY3 851 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 OLFML1Q6UWY5 402 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 MAMDC2Q7Z304 686 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 ZC3H7AQ8IWR0 971 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 LCORLQ8N3X6 602 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 ANKRD53Q8N9V6 530 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 ST13P5Q8NFI4 369 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 SH3RF2Q8TEC5 729 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 OSBP2Q969R2 916 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 MRRFQ96E11 262 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 BBC3Q96PG8 261 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 MNTQ99583 582 aa4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 CTDP1Q9Y5B0 961 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 RBM8AQ9Y5S9 174 aaKnown RBP4.78□□□□□ -1.64
TRAPPC13-203ENST00000415825 UBE2QL1A1L167 161 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 CLASP2O75122 1294 aaKnown RBP4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 LAG3P18627 525 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 ADCY7P51828 1080 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 NTRK3Q16288 839 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 LRSAM1Q6UWE0 723 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 C16orf59Q7L2K0 433 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 OSTM1Q86WC4 334 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 CPT1CQ8TCG5 803 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 C16orf92Q96LL3 132 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
TRAPPC13-203ENST00000415825 BTBD7Q9P203 1132 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms