RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 POLR3KQ9Y2Y1 108 aaPredicted RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 PCDHB14Q9Y5E9 798 aa5.71□□□□□ -1.5
VPS41-205ENST00000414632 RBM8AQ9Y5S9 174 aaKnown RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 FRMPD2Q68DX3 1309 aaPredicted RBP5.71□□□□□ -1.5
VPS41-205ENST00000414632 TMEM232C9JQI7 657 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 E7EWF7 191 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 ADCY3O60266 1144 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 RGS9O75916 674 aaPredicted RBP5.7□□□□□ -1.5
VPS41-205ENST00000414632 ATE1O95260 518 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 GSTP1P09211 210 aaKnown RBP5.7□□□□□ -1.5
VPS41-205ENST00000414632 BMP3P12645 472 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 SLC16A2P36021 539 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 GSTM4Q03013 218 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 ARHGEF6Q15052 776 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 PKN2Q16513 984 aaKnown RBP5.7□□□□□ -1.5
VPS41-205ENST00000414632 PPP2R5EQ16537 467 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 FXNQ16595 210 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 LARP1BQ659C4 914 aaKnown RBP5.7□□□□□ -1.5
VPS41-205ENST00000414632 HGSNATQ68CP4 663 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 RCSD1Q6JBY9 416 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 LBX2Q6XYB7 198 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.7□□□□□ -1.5
VPS41-205ENST00000414632 KIAA1211Q6ZU35 1233 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 GPR142Q7Z601 462 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 LSRQ86X29 649 aaPredicted RBP5.7□□□□□ -1.5
VPS41-205ENST00000414632 CPXCR1Q8N123 301 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 MICAL1Q8TDZ2 1067 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 ESR2Q92731 530 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 MDFIQ99750 246 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 SLF1Q9BQI6 1058 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 MOV10L1Q9BXT6 1211 aaKnown RBP5.7□□□□□ -1.5
VPS41-205ENST00000414632 SPATC1LQ9H0A9 340 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 CPVLQ9H3G5 476 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 RNF41Q9H4P4 317 aaPredicted RBP5.7□□□□□ -1.5
VPS41-205ENST00000414632 ZSWIM5Q9P217 1185 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 CTNNA3Q9UI47 895 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 PPP1R9AQ9ULJ8 1098 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 RABGAP1Q9Y3P9 1069 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 TNKSO95271 1327 aa5.7□□□□□ -1.5
VPS41-205ENST00000414632 BAZ2BQ9UIF8 2168 aaKnown RBP5.69□□□□□ -1.5
VPS41-205ENST00000414632 LRRC37A2A6NM11 1700 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 H3BRJ5 948 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 VWA5AO00534 786 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 SLC27A2O14975 620 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 PDPK1O15530 556 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 GOLGA8HP0CJ92 632 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 TOP1P11387 765 aaKnown RBP5.69□□□□□ -1.5
VPS41-205ENST00000414632 HOXD10P28358 340 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 MAPK4P31152 587 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 GRK4P32298 578 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 SLC1A4P43007 532 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 CCNA1P78396 465 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 GAS6Q14393 721 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 CCL14Q16627 93 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 CREB3L3Q68CJ9 461 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 SNRNP48Q6IEG0 339 aaKnown RBP5.69□□□□□ -1.5
VPS41-205ENST00000414632 CCDC174Q6PII3 467 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 RUFY4Q6ZNE9 571 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 PLEKHH3Q7Z736 793 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 RALYLQ86SE5 291 aaKnown RBP5.69□□□□□ -1.5
VPS41-205ENST00000414632 FCHSD1Q86WN1 690 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 RAB11FIP4Q86YS3 637 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 CACTIN-AS1Q8N1I8 211 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 IL22RA1Q8N6P7 574 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 ENAHQ8N8S7 591 aaPredicted RBP5.69□□□□□ -1.5
VPS41-205ENST00000414632 GMCL1P1Q8NEA9 526 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 REPS2Q8NFH8 660 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 NUDT8Q8WV74 236 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 SLC7A3Q8WY07 619 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 MAP4K1Q92918 833 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 ZNF333Q96JL9 665 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 LRRC2Q9BYS8 371 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 KRT23Q9C075 422 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 RAVER2Q9HCJ3 691 aaKnown RBP5.69□□□□□ -1.5
VPS41-205ENST00000414632 HOMER2Q9NSB8 354 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 CACNA2D2Q9NY47 1150 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 HOXC10Q9NYD6 342 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 GJD2Q9UKL4 321 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 MAPK8IP1Q9UQF2 711 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 RIPK3Q9Y572 518 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 CTDP1Q9Y5B0 961 aaPredicted RBP5.69□□□□□ -1.5
VPS41-205ENST00000414632 ALPK3Q96L96 1907 aa5.69□□□□□ -1.5
VPS41-205ENST00000414632 DNAH12Q6ZR08 3092 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 ELOA3CA0A087WX78 387 aaPredicted RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 ELOA3DA6NLF2 546 aaPredicted RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 GFRA2O00451 464 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 ZBED4O75132 1171 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 PGK2P07205 417 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 PDHBP11177 359 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 PCP11498 1178 aaKnown RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 CCL5P13501 91 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 EN2P19622 333 aaPredicted RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 STAT3P40763 770 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 RGS2P41220 211 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 STAT2P52630 851 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 PRMT2P55345 433 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 ANTXR2P58335 489 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 C19orf57Q0VDD7 668 aa5.68□□□□□ -1.5
VPS41-205ENST00000414632 IFRD2Q12894 506 aaPredicted RBP5.68□□□□□ -1.5
VPS41-205ENST00000414632 TRDNQ13061 729 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms