RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 ZSCAN29Q8IWY8 852 aaPredicted RBP4.41□□□□□ -1.7
LINC01048-201ENST00000414480 ANKRD20A12PQ8NF67 263 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 TNIP2Q8NFZ5 429 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 UBASH3BQ8TF42 649 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 CTNNBL1Q8WYA6 563 aaPredicted RBP4.41□□□□□ -1.7
LINC01048-201ENST00000414480 TNPO1Q92973 898 aaKnown RBP4.41□□□□□ -1.7
LINC01048-201ENST00000414480 WNT8BQ93098 351 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 SNX21Q969T3 373 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 MFSD14AQ96MC6 490 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 MMTAG2Q9BU76 263 aaKnown RBP4.41□□□□□ -1.7
LINC01048-201ENST00000414480 TRIM8Q9BZR9 551 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 ZNF408Q9H9D4 720 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 LGR6Q9HBX8 967 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 NGRNQ9NPE2 291 aaKnown RBP4.41□□□□□ -1.7
LINC01048-201ENST00000414480 ADARB2Q9NS39 739 aaKnown RBP4.41□□□□□ -1.7
LINC01048-201ENST00000414480 TOMM22Q9NS69 142 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 GPRC5DQ9NZD1 345 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 VTI1BQ9UEU0 232 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.41□□□□□ -1.7
LINC01048-201ENST00000414480 BLOC1S6Q9UL45 172 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 NOB1Q9ULX3 412 aaKnown RBP4.41□□□□□ -1.7
LINC01048-201ENST00000414480 LEMD3Q9Y2U8 911 aa4.41□□□□□ -1.7
LINC01048-201ENST00000414480 RBBP6Q7Z6E9 1792 aaKnown RBP4.4□□□□□ -1.7
LINC01048-201ENST00000414480 PAPPA2Q9BXP8 1791 aa4.4□□□□□ -1.7
LINC01048-201ENST00000414480 CENPFP49454 3210 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 A0A0B4J203 849 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 H3BRB1 525 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 H3BRJ5 948 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 SLC27A2O14975 620 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 DDX3YO15523 660 aaKnown RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 RASA4O43374 803 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 GAS2O43903 313 aaKnown RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 BBOX1O75936 387 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 RHOBTB3O94955 611 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 ARIH2O95376 493 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 TBC1D8O95759 1140 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 VIMP08670 466 aaKnown RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 MYBL2P10244 700 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 SLC5A1P13866 664 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 JUNBP17275 347 aaPredicted RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 ITGB5P18084 799 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 PTPRAP18433 802 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 EPHA1P21709 976 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 ENPP1P22413 925 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 TPP2P29144 1249 aaPredicted RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 SCNN1AP37088 669 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 NEK3P51956 506 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 AP2B1P63010 937 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 FAPQ12884 760 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 COX20Q5RI15 118 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 CCDC122Q5T0U0 273 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 FKBP15Q5T1M5 1219 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 ARMC4Q5T2S8 1044 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 FIP1L1Q6UN15 594 aaKnown RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 METTL16Q86W50 562 aaKnown RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 SLC44A2Q8IWA5 706 aaPredicted RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 RTKN2Q8IZC4 609 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 CCAR2Q8N163 923 aaKnown RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 TAB3Q8N5C8 712 aaPredicted RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 ENAHQ8N8S7 591 aaPredicted RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 BRSK1Q8TDC3 778 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 STK32AQ8WU08 396 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 NUP133Q8WUM0 1156 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 JPH3Q8WXH2 748 aaPredicted RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 TRIM63Q969Q1 353 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 NACC2Q96BF6 587 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 HVCN1Q96D96 273 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 KLHDC7BQ96G42 594 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 SLC39A13Q96H72 371 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 OSBPL1AQ9BXW6 950 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 CCDC68Q9H2F9 335 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 TMX1Q9H3N1 280 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 R3HDMLQ9H3Y0 253 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 TUT1Q9H6E5 874 aaKnown RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 CNNM2Q9H8M5 875 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 TRPV5Q9NQA5 729 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 PAPOLBQ9NRJ5 636 aaKnown RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 PPP4R2Q9NY27 417 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 SPATA7Q9P0W8 599 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 ZNF69Q9UC07 566 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 CCDC39Q9UFE4 941 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 CTNNA3Q9UI47 895 aa4.4□□□□□ -1.71
LINC01048-201ENST00000414480 BARX2Q9UMQ3 279 aaPredicted RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 MORC2Q9Y6X9 1032 aaPredicted RBP4.4□□□□□ -1.71
LINC01048-201ENST00000414480 ARPC4-TTLL3A0A0A6YYG9 625 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 SYNDIG1LA6NDD5 238 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 RTCAO00442 366 aaKnown RBP4.39□□□□□ -1.71
LINC01048-201ENST00000414480 SPTLC2O15270 562 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 BAIAP3O94812 1187 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 STAMBPO95630 424 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 SLC4A1P02730 911 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 ZNF24P17028 368 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 MAP4P27816 1152 aaKnown RBP4.39□□□□□ -1.71
LINC01048-201ENST00000414480 ZNF76P36508 570 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 NOP2P46087 812 aaKnown RBP4.39□□□□□ -1.71
LINC01048-201ENST00000414480 MXI1P50539 228 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 PDE6CP51160 858 aa4.39□□□□□ -1.71
LINC01048-201ENST00000414480 ZNF157P51786 506 aaPredicted RBP4.39□□□□□ -1.71
LINC01048-201ENST00000414480 EIF6P56537 245 aaKnown RBP4.39□□□□□ -1.71
LINC01048-201ENST00000414480 CABP4P57796 275 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms