RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 SPOUT1Q5T280 376 aaKnown RBP16.26■□□□□ 0.19
SNHG17-201ENST00000413755 TRMT1LQ7Z2T5 733 aaKnown RBP16.26■□□□□ 0.19
SNHG17-201ENST00000413755 COLGALT1Q8NBJ5 622 aa16.26■□□□□ 0.19
SNHG17-201ENST00000413755 ELAC1Q9H777 363 aaKnown RBP16.26■□□□□ 0.19
SNHG17-201ENST00000413755 TLR9Q9NR96 1032 aa16.26■□□□□ 0.19
SNHG17-201ENST00000413755 AAASQ9NRG9 546 aa16.26■□□□□ 0.19
SNHG17-201ENST00000413755 TBC1D22BQ9NU19 505 aa16.26■□□□□ 0.19
SNHG17-201ENST00000413755 TMEM161AQ9NX61 479 aa16.26■□□□□ 0.19
SNHG17-201ENST00000413755 EDIL3O43854 480 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 METAP2P50579 478 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNHG17-201ENST00000413755 APOBRQ0VD83 1088 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 KRT32Q14532 448 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 LRRC55Q6ZSA7 311 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
SNHG17-201ENST00000413755 METTL13Q8N6R0 699 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 LINC01465Q8N7H1 131 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 MFSD14AQ96MC6 490 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 ATP6V0A4Q9HBG4 840 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 RNF19AQ9NV58 838 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 GABBR1Q9UBS5 961 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 PCDHA10Q9Y5I2 948 aa16.25■□□□□ 0.19
SNHG17-201ENST00000413755 CIITAP33076 1130 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 MRE11P49959 708 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 CLCN3P51790 818 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
SNHG17-201ENST00000413755 KCNC3Q14003 757 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 PRR16Q569H4 304 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 BMP8AQ7Z5Y6 402 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 THNSL1Q8IYQ7 743 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 RASGRP4Q8TDF6 673 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 SUSD6Q92537 303 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 KCNB2Q92953 911 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 LENG9Q96B70 501 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 CASD1Q96PB1 797 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 CDCA3Q99618 268 aaPredicted RBP16.24■□□□□ 0.19
SNHG17-201ENST00000413755 PHF7Q9BWX1 381 aaPredicted RBP16.24■□□□□ 0.19
SNHG17-201ENST00000413755 ADAMTS10Q9H324 1103 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 C6orf50Q9HD87 102 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
SNHG17-201ENST00000413755 NAP1L2Q9ULW6 460 aaPredicted RBP16.24■□□□□ 0.19
SNHG17-201ENST00000413755 KIAA1671Q9BY89 1806 aa16.24■□□□□ 0.19
SNHG17-201ENST00000413755 MUC6Q6W4X9 2439 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 CCDC196A0A1B0GTZ2 297 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 MAGEB2O15479 319 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 PRPF3O43395 683 aaKnown RBP16.23■□□□□ 0.19
SNHG17-201ENST00000413755 ZNF862O60290 1169 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 PSAPP07602 524 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
SNHG17-201ENST00000413755 NLRP11P59045 1033 aaKnown RBP16.23■□□□□ 0.19
SNHG17-201ENST00000413755 ZXDAP98168 799 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 PLCB3Q01970 1234 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 MCTP2Q6DN12 878 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 TMEM184AQ6ZMB5 413 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 TRIM67Q6ZTA4 783 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 Q6ZUG5 572 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 REXO1Q8N1G1 1221 aaKnown RBP16.23■□□□□ 0.19
SNHG17-201ENST00000413755 MRPS27Q92552 414 aaKnown RBP16.23■□□□□ 0.19
SNHG17-201ENST00000413755 TMEM117Q9H0C3 514 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 S1PR5Q9H228 398 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 CEP131Q9UPN4 1083 aa16.23■□□□□ 0.19
SNHG17-201ENST00000413755 NEFLP07196 543 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 ATF7P17544 494 aaPredicted RBP16.22■□□□□ 0.19
SNHG17-201ENST00000413755 LAG3P18627 525 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 GNA11P29992 359 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 NTRK3Q16288 839 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 PDE12Q6L8Q7 609 aaKnown RBP16.22■□□□□ 0.19
SNHG17-201ENST00000413755 EFCAB12Q6NXP0 572 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 LRRC71Q8N4P6 559 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 BRF1Q92994 677 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 PHKBQ93100 1093 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 RPGRIP1Q96KN7 1286 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 LZTS1Q9Y250 596 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 NID2Q14112 1375 aa16.22■□□□□ 0.19
SNHG17-201ENST00000413755 TMEM221A6NGB7 291 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 M0R296 226 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 CDC45O75419 566 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 EIF4BP23588 611 aaKnown RBP16.21■□□□□ 0.19
SNHG17-201ENST00000413755 FGD1P98174 961 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 PLPP4Q5VZY2 271 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 KCNT2Q6UVM3 1135 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 ECHDC2Q86YB7 292 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 FBXL16Q8N461 479 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.19
SNHG17-201ENST00000413755 ZNF668Q96K58 619 aaPredicted RBP16.21■□□□□ 0.19
SNHG17-201ENST00000413755 FAM167AQ96KS9 214 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 TCF25Q9BQ70 676 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 AKT3Q9Y243 479 aa16.21■□□□□ 0.19
SNHG17-201ENST00000413755 PLXNA4Q9HCM2 1894 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 C5orf42Q9H799 3197 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 HIDE1A8MVS5 230 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 WDR64B1ANS9 1081 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 MSH4O15457 936 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 ZSCAN20P17040 1043 aaPredicted RBP16.2■□□□□ 0.18
SNHG17-201ENST00000413755 PBX3P40426 434 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 GPC3P51654 580 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 UGCGQ16739 394 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 IER5LQ5T953 404 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 ANKRD54Q6NXT1 300 aa16.2■□□□□ 0.18
SNHG17-201ENST00000413755 SYCE2Q6PIF2 218 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms