RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SYCE2Q6PIF2 218 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 LRRC55Q6ZSA7 311 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 LINC01465Q8N7H1 131 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 MICAL1Q8TDZ2 1067 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 RPGRIP1Q96KN7 1286 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 NEK1Q96PY6 1258 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 PRRX2Q99811 253 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 ZNF302Q9NR11 478 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
LIMS2-210ENST00000413578 MYO15AQ9UKN7 3530 aa13.84□□□□□ -0.19
LIMS2-210ENST00000413578 PLXNA4Q9HCM2 1894 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 SMCO2A6NFE2 343 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 DDX39AO00148 427 aaKnown RBP13.83□□□□□ -0.2
LIMS2-210ENST00000413578 BACH1O14867 736 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 LAG3P18627 525 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 SWSAP1Q6NVH7 229 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 ANKRD54Q6NXT1 300 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 MIS18BP1Q6P0N0 1132 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 PLA2G4DQ86XP0 818 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 THNSL1Q8IYQ7 743 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 BBXQ8WY36 941 aaPredicted RBP13.83□□□□□ -0.2
LIMS2-210ENST00000413578 MRPS27Q92552 414 aaKnown RBP13.83□□□□□ -0.2
LIMS2-210ENST00000413578 CASD1Q96PB1 797 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 OSMRQ99650 979 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 TMEM117Q9H0C3 514 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 GLT8D2Q9H1C3 349 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 ATP6V0A4Q9HBG4 840 aa13.83□□□□□ -0.2
LIMS2-210ENST00000413578 V9GY48 417 aaPredicted RBP13.83□□□□□ -0.2
LIMS2-210ENST00000413578 HIDE1A8MVS5 230 aa13.82□□□□□ -0.2
LIMS2-210ENST00000413578 IPO5O00410 1097 aaKnown RBP13.82□□□□□ -0.2
LIMS2-210ENST00000413578 ADAMTS3O15072 1205 aa13.82□□□□□ -0.2
LIMS2-210ENST00000413578 CDC27P30260 824 aa13.82□□□□□ -0.2
LIMS2-210ENST00000413578 VCPP55072 806 aaKnown RBP13.82□□□□□ -0.2
LIMS2-210ENST00000413578 APOBRQ0VD83 1088 aa13.82□□□□□ -0.2
LIMS2-210ENST00000413578 RTN1Q16799 776 aa13.82□□□□□ -0.2
LIMS2-210ENST00000413578 PTPN21Q16825 1174 aa13.82□□□□□ -0.2
LIMS2-210ENST00000413578 SPOUT1Q5T280 376 aaKnown RBP13.82□□□□□ -0.2
LIMS2-210ENST00000413578 ZNF746Q6NUN9 644 aaPredicted RBP13.82□□□□□ -0.2
LIMS2-210ENST00000413578 SUGP1Q8IWZ8 645 aaKnown RBP13.82□□□□□ -0.2
LIMS2-210ENST00000413578 ADAMTS10Q9H324 1103 aa13.82□□□□□ -0.2
LIMS2-210ENST00000413578 NGRNQ9NPE2 291 aaKnown RBP13.82□□□□□ -0.2
LIMS2-210ENST00000413578 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
LIMS2-210ENST00000413578 ESYT2A0FGR8 921 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 VTNP04004 478 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 IBSPP21815 317 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-210ENST00000413578 RCAN1P53805 252 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 TSGA10IPQ3SY00 556 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 JAKMIP3Q5VZ66 844 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 PLPP4Q5VZY2 271 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 KCNT2Q6UVM3 1135 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 SYNE3Q6ZMZ3 975 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 SMAP1Q8IYB5 467 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-210ENST00000413578 TCEANC2Q96MN5 208 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 YTHDC1Q96MU7 727 aaKnown RBP13.81□□□□□ -0.2
LIMS2-210ENST00000413578 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 TCF25Q9BQ70 676 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 TBC1D22BQ9NU19 505 aa13.81□□□□□ -0.2
LIMS2-210ENST00000413578 ZBTB43O43298 467 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 HOXA2O43364 376 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 HOXB8P17481 243 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-210ENST00000413578 AVPR2P30518 371 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 ZNF76P36508 570 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 TECP42680 631 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 CLCN3P51790 818 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 SETQ01105 290 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-210ENST00000413578 PFKFB3Q16875 520 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-210ENST00000413578 ADCK5Q3MIX3 580 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 DHX32Q7L7V1 743 aaKnown RBP13.8□□□□□ -0.2
LIMS2-210ENST00000413578 LRRC43Q8N309 656 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 LENG9Q96B70 501 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 ZMYND12Q9H0C1 365 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 ANO2Q9NQ90 1003 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 ZFHX2Q9C0A1 2572 aaPredicted RBP13.8□□□□□ -0.2
LIMS2-210ENST00000413578 KMT2EQ8IZD2 1858 aa13.8□□□□□ -0.2
LIMS2-210ENST00000413578 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 MAGEB2O15479 319 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 EDIL3O43854 480 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 ST18O60284 1047 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 ZNF862O60290 1169 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 PDGFBP01127 241 aaPredicted RBP13.79□□□□□ -0.2
LIMS2-210ENST00000413578 SRGAP2BP0DMP2 458 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 CIITAP33076 1130 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 PPM1AP35813 382 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 PBX3P40426 434 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 CLLU1OSQ5K130 101 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 ZNF598Q86UK7 904 aaKnown RBP13.79□□□□□ -0.2
LIMS2-210ENST00000413578 ECHDC2Q86YB7 292 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 METTL13Q8N6R0 699 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 ZNF558Q96NG5 402 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 ZNF577Q9BSK1 485 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 ENTPD7Q9NQZ7 604 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 PUF60Q9UHX1 559 aaKnown RBP13.79□□□□□ -0.2
LIMS2-210ENST00000413578 CDH22Q9UJ99 828 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 CEP131Q9UPN4 1083 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 PCDHA10Q9Y5I2 948 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 HCFC2Q9Y5Z7 792 aa13.79□□□□□ -0.2
LIMS2-210ENST00000413578 LOXHD1Q8IVV2 1947 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms