RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FGGP02679 453 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 NR3C1P04150 777 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 DRG2P55039 364 aaKnown RBP19.15■□□□□ 0.66
SDCBP-202ENST00000413219 PPATQ06203 517 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 SPRED3Q2MJR0 410 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 DCAF17Q5H9S7 520 aaPredicted RBP19.15■□□□□ 0.66
SDCBP-202ENST00000413219 SFR1Q86XK3 245 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 FMNL3Q8IVF7 1028 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 CCDC24Q8N4L8 307 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 GIMAP7Q8NHV1 300 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 ERP44Q9BS26 406 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 ZDHHC18Q9NUE0 388 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 AJAP1Q9UKB5 411 aaPredicted RBP19.15■□□□□ 0.66
SDCBP-202ENST00000413219 GOLGA6L10A0A0M3HER8 536 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 AKR1B1P15121 316 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 DHX34Q14147 1143 aaKnown RBP19.15■□□□□ 0.66
SDCBP-202ENST00000413219 PTPROQ16827 1216 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 NBPF9Q3BBW0 867 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 DNAAF5Q86Y56 855 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 HVCN1Q96D96 273 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 HAUS2Q9NVX0 235 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 DNM3Q9UQ16 869 aa19.15■□□□□ 0.66
SDCBP-202ENST00000413219 POTEFA5A3E0 1075 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 F8W031 263 aaPredicted RBP19.14■□□□□ 0.65
SDCBP-202ENST00000413219 TBX3O15119 743 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 BUB1BO60566 1050 aaPredicted RBP19.14■□□□□ 0.65
SDCBP-202ENST00000413219 POTEIP0CG38 1075 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 SLC8A1P32418 973 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 POTEGQ6S5H5 508 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 POTEEQ6S8J3 1075 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 DPP8Q6V1X1 898 aaPredicted RBP19.14■□□□□ 0.65
SDCBP-202ENST00000413219 CCDC197Q8NCU1 140 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 OLIG1Q8TAK6 271 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 LNX1Q8TBB1 728 aaPredicted RBP19.14■□□□□ 0.65
SDCBP-202ENST00000413219 REEP2Q9BRK0 252 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 PABPC3Q9H361 631 aaKnown RBP19.14■□□□□ 0.65
SDCBP-202ENST00000413219 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.14■□□□□ 0.65
SDCBP-202ENST00000413219 ATP8A1Q9Y2Q0 1164 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 DAAM1Q9Y4D1 1078 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 ASTN1O14525 1302 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 FOCADQ5VW36 1801 aa19.14■□□□□ 0.65
SDCBP-202ENST00000413219 PHF20L1A8MW92 1017 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 ASAP2O43150 1006 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 GSTA1P08263 222 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 RPA1P27694 616 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 DR1Q01658 176 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 SPIRE1Q08AE8 756 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 NFIXQ14938 502 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 TCERG1LQ5VWI1 586 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 CATSPER3Q86XQ3 398 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 NEK9Q8TD19 979 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 TBC1D22AQ8WUA7 517 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 ZNF317Q96PQ6 595 aaPredicted RBP19.13■□□□□ 0.65
SDCBP-202ENST00000413219 TRIM51Q9BSJ1 452 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 STRCQ7RTU9 1775 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 CCT8L1PA6NM43 557 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 CCDC169A6NNP5 214 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 MGRN1O60291 552 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 CAND2O75155 1236 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 GBP1P32455 592 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 SOX5P35711 763 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 MMP13P45452 471 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 ITIH4Q14624 930 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 PLS1Q14651 629 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 NFIL3Q16649 462 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 TTBK2Q6IQ55 1244 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 BARGINQ6ZT62 677 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 ANKS4BQ8N8V4 417 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 SLC35G2Q8TBE7 412 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 ANO3Q9BYT9 981 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 EPB41L4BQ9H329 900 aa19.13■□□□□ 0.65
SDCBP-202ENST00000413219 TPX2Q9ULW0 747 aaKnown RBP19.13■□□□□ 0.65
SDCBP-202ENST00000413219 USP17L10C9JJH3 530 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 PPIP5K2O43314 1243 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 KIF1CO43896 1103 aaKnown RBP19.12■□□□□ 0.65
SDCBP-202ENST00000413219 EVI5O60447 810 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 CTNND1O60716 968 aaKnown RBP19.12■□□□□ 0.65
SDCBP-202ENST00000413219 TRIM37O94972 964 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 RFC4P35249 363 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 STAT3P40763 770 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 PMS2P54278 862 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 AP3B2Q13367 1082 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 ETNPPLQ8TBG4 499 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 CTNNBL1Q8WYA6 563 aaPredicted RBP19.12■□□□□ 0.65
SDCBP-202ENST00000413219 BORCS6Q96GS4 357 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 SYT11Q9BT88 431 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 STK33Q9BYT3 514 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 RASAL2Q9UJF2 1139 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 PNMA2Q9UL42 364 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 HSPA6P17066 643 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 ATP2B4P23634 1241 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 NF2P35240 595 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 KLRC3Q07444 240 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 SPATA31A5Q5VU36 1347 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 DCAF12L1Q5VU92 463 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 SMIM5Q71RC9 77 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 FAM228AQ86W67 206 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 SPATA31A7Q8IWB4 1347 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 KCTD17Q8N5Z5 321 aa19.12■□□□□ 0.65
SDCBP-202ENST00000413219 TMEM109Q9BVC6 243 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms