RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 MUTP22033 750 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 RARRES1P49788 294 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 GRIN1Q05586 938 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 POTEGQ6S5H5 508 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 METTL13Q8N6R0 699 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 TMEM40Q8WWA1 233 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 CEP170P1Q96L14 293 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 USP28Q96RU2 1077 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 ADAMTS10Q9H324 1103 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 AGO3Q9H9G7 860 aaKnown RBP14.72□□□□□ -0.05
HDAC8-210ENST00000412342 CDHR5Q9HBB8 845 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 XPNPEP1Q9NQW7 623 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 SQORQ9Y6N5 450 aa14.72□□□□□ -0.05
HDAC8-210ENST00000412342 MORC2Q9Y6X9 1032 aaPredicted RBP14.72□□□□□ -0.05
HDAC8-210ENST00000412342 SZT2Q5T011 3432 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 VWA3AA6NCI4 1184 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 F13A1P00488 732 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 ZSCAN22P10073 491 aaPredicted RBP14.71□□□□□ -0.05
HDAC8-210ENST00000412342 ACTN1P12814 892 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 XRCC6P12956 609 aaKnown RBP eCLIP14.71□□□□□ -0.05
HDAC8-210ENST00000412342 CDC25AP30304 524 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 RFC5P40937 340 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 XKR9Q5GH70 373 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 HAUS3Q68CZ6 603 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 TSHZ1Q6ZSZ6 1077 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 OTUD6AQ7L8S5 288 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 ERMNQ8TAM6 284 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 PIGOQ8TEQ8 1089 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 LRCH3Q96II8 777 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 SUGCTQ9HAC7 445 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 ZDHHC9Q9Y397 364 aa14.71□□□□□ -0.05
HDAC8-210ENST00000412342 ABHD14A-ACY1A0A1B0GW23 586 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 TMOD1P28289 359 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 CCT6AP40227 531 aaKnown RBP14.7□□□□□ -0.06
HDAC8-210ENST00000412342 NASPP49321 788 aaPredicted RBP14.7□□□□□ -0.06
HDAC8-210ENST00000412342 GPC3P51654 580 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 WDR5P61964 334 aaKnown RBP14.7□□□□□ -0.06
HDAC8-210ENST00000412342 EMC2Q15006 297 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 KIZQ2M2Z5 673 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 HYIQ5T013 277 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 SNX29Q8TEQ0 813 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 SEPT8Q92599 483 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 NACC1Q96RE7 527 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 MAP7D2Q96T17 732 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 PPP1R16BQ96T49 567 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 IFIH1Q9BYX4 1025 aaKnown RBP14.7□□□□□ -0.06
HDAC8-210ENST00000412342 RAB34Q9BZG1 259 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 MTIF3Q9H2K0 278 aaKnown RBP14.7□□□□□ -0.06
HDAC8-210ENST00000412342 FBXO2Q9UK22 296 aaPredicted RBP14.7□□□□□ -0.06
HDAC8-210ENST00000412342 DBR1Q9UK59 544 aaKnown RBP14.7□□□□□ -0.06
HDAC8-210ENST00000412342 AKT3Q9Y243 479 aa14.7□□□□□ -0.06
HDAC8-210ENST00000412342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-210ENST00000412342 GRXCR1A8MXD5 290 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 M0QZ92 97 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 BRD1O95696 1058 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 CD52P31358 61 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 CRYBB1P53674 252 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-210ENST00000412342 POLGP54098 1239 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-210ENST00000412342 NLRP11P59045 1033 aaKnown RBP14.69□□□□□ -0.06
HDAC8-210ENST00000412342 DEFB103AP81534 67 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 SMAD3P84022 425 aaKnown RBP14.69□□□□□ -0.06
HDAC8-210ENST00000412342 BECN1Q14457 450 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 USP38Q8NB14 1042 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 LINC01599Q8WXQ3 324 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 SLC7A3Q8WY07 619 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 APBB2Q92870 758 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 PNMA5Q96PV4 448 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 OSMRQ99650 979 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 JPH2Q9BR39 696 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-210ENST00000412342 ERVK-5Q9HDB9 667 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-210ENST00000412342 NOC2LQ9Y3T9 749 aaKnown RBP14.69□□□□□ -0.06
HDAC8-210ENST00000412342 STK24Q9Y6E0 443 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 SLC4A7Q9Y6M7 1214 aa14.69□□□□□ -0.06
HDAC8-210ENST00000412342 COL4A6Q14031 1691 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 ZBBXA8MT70 800 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 GAS2O43903 313 aaKnown RBP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 DGAT1O75907 488 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 GRB10Q13322 594 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 IKBKEQ14164 716 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 SLC39A14Q15043 492 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 FOXD4L5Q5VV16 416 aaPredicted RBP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 KRT79Q5XKE5 535 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 KCNK18Q7Z418 384 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 FAM228AQ86W67 206 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 EXOC8Q8IYI6 725 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 ZNF710Q8N1W2 664 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 FOXD4L4Q8WXT5 416 aaPredicted RBP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 TMEM143Q96AN5 459 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 ZNF668Q96K58 619 aaPredicted RBP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 AK8Q96MA6 479 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 SLC9A7Q96T83 725 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 TMX1Q9H3N1 280 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 DDX19AQ9NUU7 478 aaKnown RBP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 SUCLA2Q9P2R7 463 aaPredicted RBP14.68□□□□□ -0.06
HDAC8-210ENST00000412342 PADI3Q9ULW8 664 aa14.68□□□□□ -0.06
HDAC8-210ENST00000412342 KIAA1024Q9UPX6 916 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms