RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 IL23AQ9NPF7 189 aa17.23■□□□□ 0.35
TRAPPC12-203ENST00000411973 CIZ1Q9ULV3 898 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC12-203ENST00000411973 KIAA1024Q9UPX6 916 aa17.23■□□□□ 0.35
TRAPPC12-203ENST00000411973 KDM3AQ9Y4C1 1321 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 SIP14410 1827 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 CHRNA1P02708 482 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 PFKMP08237 780 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 UBA7P41226 1012 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 MRPS6P82932 125 aaKnown RBP17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 MGAT3Q09327 533 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 MKRN4PQ13434 485 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 MBTPS1Q14703 1052 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 IER5Q5VY09 327 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 CABP7Q86V35 215 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 ZNF710Q8N1W2 664 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 SLC7A3Q8WY07 619 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 CCSER1Q9C0I3 900 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 NT5C3AQ9H0P0 336 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 SUGCTQ9HAC7 445 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 DDX19AQ9NUU7 478 aaKnown RBP17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 RCOR1Q9UKL0 485 aa17.22■□□□□ 0.35
TRAPPC12-203ENST00000411973 A0A087WWV3 80 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 GAS2O43903 313 aaKnown RBP17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 DGAT1O75907 488 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 CXCL10P02778 98 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 CTSHP09668 335 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 DNM2P50570 870 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 CLCN3P51790 818 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 POLGP54098 1239 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 KRT85P78386 507 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 GRB10Q13322 594 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 C16orf59Q7L2K0 433 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 CLIC6Q96NY7 704 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 PNMA5Q96PV4 448 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 MAP7D2Q96T17 732 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 DNM3Q9UQ16 869 aa17.21■□□□□ 0.35
TRAPPC12-203ENST00000411973 NBNO60934 754 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 EYA4O95677 639 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 EPHB4P54760 987 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 CDC42EP1Q00587 391 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 EMC2Q15006 297 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 TMEM119Q4V9L6 283 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 CCDC43Q96MW1 224 aaKnown RBP17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 CELF4Q9BZC1 486 aaKnown RBP17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 UBE2OQ9C0C9 1292 aaKnown RBP17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 TRPV2Q9Y5S1 764 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 CDY2AQ9Y6F7 541 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 SQORQ9Y6N5 450 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 TRIOBPQ9H2D6 2365 aa17.2■□□□□ 0.34
TRAPPC12-203ENST00000411973 E9PMD0 336 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 M0QZ92 97 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 CUTAO60888 179 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 GPR32O75388 356 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 TMEM62Q0P6H9 643 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 DRP2Q13474 957 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 AXDND1Q5T1B0 1012 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 PSRC1Q6PGN9 363 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 USP49Q70CQ1 688 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 KCNK18Q7Z418 384 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 SYMPKQ92797 1274 aaKnown RBP17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 EPSTI1Q96J88 318 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 CDK5RAP3Q96JB5 506 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 MTRQ99707 1265 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 BHMT2Q9H2M3 363 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 ATP6V0A4Q9HBG4 840 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 XPNPEP1Q9NQW7 623 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 AKT3Q9Y243 479 aa17.19■□□□□ 0.34
TRAPPC12-203ENST00000411973 ARHGEF35A5YM69 484 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 VTNP04004 478 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 ACRP10323 421 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 ZRSR1Q15695 479 aaKnown RBP17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 FBXO47Q5MNV8 452 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 TMEM240Q5SV17 173 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 PADI6Q6TGC4 694 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 DEFB128Q7Z7B8 93 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 USP38Q8NB14 1042 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 LEO1Q8WVC0 666 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 TCP11Q8WWU5 503 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.18■□□□□ 0.342e-12■■□□□ 11.9
TRAPPC12-203ENST00000411973 SCAND2PQ9GZW5 306 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 ADAMTS10Q9H324 1103 aa17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 SUCLA2Q9P2R7 463 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC12-203ENST00000411973 A0A1W2PPC1 479 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 ASAP2O43150 1006 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 CYP11B2P19099 503 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 TXLNAP40222 546 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 GPC3P51654 580 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 CRYBB1P53674 252 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 NLRP11P59045 1033 aaKnown RBP17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 LPIN1Q14693 890 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 KARSQ15046 597 aaKnown RBP17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 KIZQ2M2Z5 673 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 PLEKHG4Q58EX7 1191 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 ZNF365Q70YC5 407 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms