RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 POSTNQ15063 836 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TRADDQ15628 312 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 PTPN21Q16825 1174 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 SYTL3Q4VX76 610 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 FAM76BQ5HYJ3 339 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 BARGINQ6ZT62 677 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC105Q8IYK2 499 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ZSCAN18Q8TBC5 510 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 VPS33AQ96AX1 596 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MRRFQ96E11 262 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 SLC9A7Q96T83 725 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 APOL6Q9BWW8 343 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 FRMD8Q9BZ67 464 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TSPYL4Q9UJ04 414 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TTC7AQ9ULT0 858 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ATP8B3O60423 1300 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TRIM66O15016 1216 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 INPP4BO15327 924 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TSC22D2O75157 780 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 INHBAP08476 426 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 NLRP11P59045 1033 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 PPP2R3AQ06190 1150 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 NCF4Q15080 339 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 KCTD21Q4G0X4 260 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 LRRC8DQ7L1W4 858 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 IFT43Q96FT9 208 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 EXOC2Q96KP1 924 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ADA2Q9NZK5 511 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 RGS17Q9UGC6 210 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 DBR1Q9UK59 544 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 RAD54L2Q9Y4B4 1467 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CCDC169A6NNP5 214 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 UBAP1LF5GYI3 381 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 DDHD2O94830 711 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 F13A1P00488 732 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 FOSP01100 380 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 BCRP11274 1271 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ZNF3P17036 446 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CDH11P55287 796 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TPTEP56180 551 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 THOC5Q13769 683 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 RPS6KA1Q15418 735 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 GSTA3Q16772 222 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 IMPG1Q17R60 797 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 KIF19Q2TAC6 998 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 OLFML2AQ68BL7 652 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 GTF2IRD2BQ6EKJ0 949 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ARMCX5Q6P1M9 558 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TMEM154Q6P9G4 183 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ARHGEF18Q6ZSZ5 1173 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 GTF2IRD2Q86UP8 949 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MINDY2Q8NBR6 621 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 RPLP0P6Q8NHW5 317 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ADIPOR1Q96A54 375 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 GCNAQ96QF7 691 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ADI1Q9BV57 179 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 SLITRK2Q9H156 845 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 VTI1BQ9UEU0 232 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TELO2Q9Y4R8 837 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 PCYT1BQ9Y5K3 369 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MINK1Q8N4C8 1332 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 LYNP07948 512 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CCNCP24863 283 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 PPP2R1BP30154 601 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CBX5P45973 191 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ANXA11P50995 505 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ITGA1P56199 1179 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 VBP1P61758 197 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MRPS22P82650 360 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ARF5P84085 180 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 AKIRIN2Q53H80 203 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ANKRD26P1Q6NSI1 321 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 YTHDF3Q7Z739 585 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 RHOT2Q8IXI1 618 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 DPP10Q8N608 796 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CDCA7LQ96GN5 454 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CCNL2Q96S94 520 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CNPY3Q9BT09 278 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CINPQ9BW66 212 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TSSK1BQ9BXA7 367 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TEX13AQ9BXU3 409 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TUT1Q9H6E5 874 aaKnown RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 TMEM161AQ9NX61 479 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CDH7Q9ULB5 785 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MROH2BQ7Z745 1585 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 hCG_1642624A0A1W2PR95 340 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 H3BRB1 525 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 WEE1P30291 646 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 MAGEA10P43363 369 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 PABPC4Q13310 644 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 C10orf76Q5T2E6 689 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 CDC73Q6P1J9 531 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 UXS1Q8NBZ7 420 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 RIN3Q8TB24 985 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 APOL4Q9BPW4 351 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 ANAPC2Q9UJX6 822 aa4.88□□□□□ -1.63
PTPN13-202ENST00000411767 PNMA8BQ9ULN7 279 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-202ENST00000411767 EFR3BQ9Y2G0 817 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms