RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 MAGEB2O15479 319 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 PFKMP08237 780 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 ACTN1P12814 892 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 CCT6AP40227 531 aaKnown RBP13.39□□□□□ -0.27
NEDD1-202ENST00000411739 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
NEDD1-202ENST00000411739 NLRP11P59045 1033 aaKnown RBP13.39□□□□□ -0.27
NEDD1-202ENST00000411739 PLEKHG4Q58EX7 1191 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 CNKSR3Q6P9H4 555 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 Q7L0L9 218 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 MAEAQ7L5Y9 396 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 LINC01465Q8N7H1 131 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 FAM161BQ96MY7 647 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 PLIN2Q99541 437 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 IFIH1Q9BYX4 1025 aaKnown RBP13.39□□□□□ -0.27
NEDD1-202ENST00000411739 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
NEDD1-202ENST00000411739 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
NEDD1-202ENST00000411739 M0QZ92 97 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 CAND2O75155 1236 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 GPR32O75388 356 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 MAFO75444 373 aaPredicted RBP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 FGFR4P22455 802 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 POLGP54098 1239 aaPredicted RBP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 WDR5P61964 334 aaKnown RBP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 NFX1Q12986 1120 aaKnown RBP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 IKBKEQ14164 716 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 OTUD6AQ7L8S5 288 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 NME8Q8N427 588 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 IGSF22Q8N9C0 903 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 SNX29Q8TEQ0 813 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 SEPT8Q92599 483 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
NEDD1-202ENST00000411739 SUCLA2Q9P2R7 463 aaPredicted RBP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
NEDD1-202ENST00000411739 SIP14410 1827 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.37□□□□□ -0.27
NEDD1-202ENST00000411739 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.37□□□□□ -0.27
NEDD1-202ENST00000411739 PARNO95453 639 aaKnown RBP13.37□□□□□ -0.27
NEDD1-202ENST00000411739 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
NEDD1-202ENST00000411739 TMOD1P28289 359 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 SPECC1Q5M775 1068 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 RHPN2Q8IUC4 686 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 ERMNQ8TAM6 284 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 KIAA1024Q9UPX6 916 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 IGKV6-21A0A0C4DH24 114 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 KCNJ6P48051 423 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 USP28Q96RU2 1077 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 MMTAG2Q9BU76 263 aaKnown RBP13.37□□□□□ -0.27
NEDD1-202ENST00000411739 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
NEDD1-202ENST00000411739 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 MTIF3Q9H2K0 278 aaKnown RBP13.37□□□□□ -0.27
NEDD1-202ENST00000411739 ADAMTS10Q9H324 1103 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 TUFT1Q9NNX1 390 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 LOXHD1Q8IVV2 1947 aa13.37□□□□□ -0.27
NEDD1-202ENST00000411739 LAD1O00515 517 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 UPP2O95045 317 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 RPA1P27694 616 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 PRPHP41219 470 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 RARRES1P49788 294 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 PDIA5Q14554 519 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 EMC2Q15006 297 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 TSHZ1Q6ZSZ6 1077 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 MYOCDQ8IZQ8 938 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 NEK9Q8TD19 979 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 SLC7A3Q8WY07 619 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 CCDC43Q96MW1 224 aaKnown RBP13.36□□□□□ -0.27
NEDD1-202ENST00000411739 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 DDX19AQ9NUU7 478 aaKnown RBP13.36□□□□□ -0.27
NEDD1-202ENST00000411739 YBX2Q9Y2T7 364 aaKnown RBP13.36□□□□□ -0.27
NEDD1-202ENST00000411739 CDH23Q9H251 3354 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.36□□□□□ -0.27
NEDD1-202ENST00000411739 E9PMD0 336 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
NEDD1-202ENST00000411739 LYPLA2O95372 231 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 GPC3P51654 580 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 DHX33Q9H6R0 707 aaKnown RBP13.36□□□□□ -0.27
NEDD1-202ENST00000411739 GPRC5CQ9NQ84 441 aa13.36□□□□□ -0.27
NEDD1-202ENST00000411739 A0A087WZ62 844 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 ABHD14A-ACY1A0A1B0GW23 586 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 RPS6KA5O75582 802 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 ZSCAN22P10073 491 aaPredicted RBP13.35□□□□□ -0.27
NEDD1-202ENST00000411739 PAK2Q13177 524 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 PTPAQ15257 358 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 KRT79Q5XKE5 535 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 KCNK18Q7Z418 384 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 RTN4RL1Q86UN2 441 aaPredicted RBP13.35□□□□□ -0.27
NEDD1-202ENST00000411739 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
NEDD1-202ENST00000411739 CLIC6Q96NY7 704 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 NACC1Q96RE7 527 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 FDXACB1Q9BRP7 624 aaPredicted RBP13.35□□□□□ -0.27
NEDD1-202ENST00000411739 RAB34Q9BZG1 259 aa13.35□□□□□ -0.27
NEDD1-202ENST00000411739 TMX1Q9H3N1 280 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms