RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ZNF577Q9BSK1 485 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 ELAC1Q9H777 363 aaKnown RBP18.97■□□□□ 0.63
MRPL55-220ENST00000411464 TBC1D22BQ9NU19 505 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 TCEAL9Q9UHQ7 104 aa18.97■□□□□ 0.63
MRPL55-220ENST00000411464 ZBTB42B2RXF5 422 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 C22orf31O95567 290 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 VTNP04004 478 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 CYP3A4P08684 503 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 FGFR1P11362 822 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 ATP4AP20648 1035 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 RBM10P98175 930 aaKnown RBP18.96■□□□□ 0.63
MRPL55-220ENST00000411464 MCTP2Q6DN12 878 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 FAM228AQ86W67 206 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 NAP1L2Q9ULW6 460 aaPredicted RBP18.96■□□□□ 0.63
MRPL55-220ENST00000411464 CEP131Q9UPN4 1083 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 LZTS1Q9Y250 596 aa18.96■□□□□ 0.63
MRPL55-220ENST00000411464 MAFBQ9Y5Q3 323 aaPredicted RBP18.96■□□□□ 0.63
MRPL55-220ENST00000411464 IGLV3-22A0A075B6J6 115 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 KLF18A0A0U1RQI7 1052 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 HOXA2O43364 376 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 GPR32O75388 356 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 PSAPP07602 524 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 PLCB3Q01970 1234 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 IER5LQ5T953 404 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 ZNF746Q6NUN9 644 aaPredicted RBP18.95■□□□□ 0.62
MRPL55-220ENST00000411464 SMAP1Q8IYB5 467 aaPredicted RBP18.95■□□□□ 0.62
MRPL55-220ENST00000411464 ABI1Q8IZP0 508 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 VN1R2Q8NFZ6 395 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 SUSD6Q92537 303 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 MRPS27Q92552 414 aaKnown RBP18.95■□□□□ 0.62
MRPL55-220ENST00000411464 TMEM117Q9H0C3 514 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 CWH43Q9H720 699 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 HCSTQ9UBK5 93 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 SAMM50Q9Y512 469 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 PCDHA10Q9Y5I2 948 aa18.95■□□□□ 0.62
MRPL55-220ENST00000411464 FSCN2O14926 492 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 MAGEB2O15479 319 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 ZSCAN20P17040 1043 aaPredicted RBP18.94■□□□□ 0.62
MRPL55-220ENST00000411464 TMOD1P28289 359 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 TECP42680 631 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 PTPN5P54829 565 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 FGD1P98174 961 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 SETQ01105 290 aaPredicted RBP18.94■□□□□ 0.62
MRPL55-220ENST00000411464 KRT17Q04695 432 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 APOBRQ0VD83 1088 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 PFKFB3Q16875 520 aaPredicted RBP18.94■□□□□ 0.62
MRPL55-220ENST00000411464 PLPP4Q5VZY2 271 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 TMEM184AQ6ZMB5 413 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 FBXL6Q8N531 539 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 MAP7D2Q96T17 732 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 TCF25Q9BQ70 676 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 C6orf50Q9HD87 102 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 NGRNQ9NPE2 291 aaKnown RBP18.94■□□□□ 0.62
MRPL55-220ENST00000411464 ENTPD7Q9NQZ7 604 aa18.94■□□□□ 0.62
MRPL55-220ENST00000411464 FAM217BQ9NTX9 383 aaPredicted RBP18.94■□□□□ 0.62
MRPL55-220ENST00000411464 CCDC196A0A1B0GTZ2 297 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 CDC27P30260 824 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 RCAN1P53805 252 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 NLRP11P59045 1033 aaKnown RBP18.93■□□□□ 0.62
MRPL55-220ENST00000411464 SIGLEC14Q08ET2 396 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 KRT32Q14532 448 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 DSC3Q14574 896 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 TSGA10IPQ3SY00 556 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 ANKRD54Q6NXT1 300 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 ZNF710Q8N1W2 664 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 PRSS33Q8NF86 280 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 CCDC12Q8WUD4 166 aaPredicted RBP18.93■□□□□ 0.62
MRPL55-220ENST00000411464 CRYGNQ8WXF5 182 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 ZNF558Q96NG5 402 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 CASD1Q96PB1 797 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 GABBR1Q9UBS5 961 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 AKT3Q9Y243 479 aa18.93■□□□□ 0.62
MRPL55-220ENST00000411464 HMGB1P09429 215 aaKnown RBP18.92■□□□□ 0.62
MRPL55-220ENST00000411464 HOXB8P17481 243 aaPredicted RBP18.92■□□□□ 0.62
MRPL55-220ENST00000411464 ADD1P35611 737 aaKnown RBP18.92■□□□□ 0.62
MRPL55-220ENST00000411464 PPM1AP35813 382 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 CLCN3P51790 818 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 ADCK5Q3MIX3 580 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 PRR16Q569H4 304 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 EFCAB12Q6NXP0 572 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 LLGL2Q6P1M3 1020 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 KCNT2Q6UVM3 1135 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 TMC7Q7Z402 723 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 RASEFQ8IZ41 740 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 REXO1Q8N1G1 1221 aaKnown RBP18.92■□□□□ 0.62
MRPL55-220ENST00000411464 LRRC43Q8N309 656 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 RASGRP4Q8TDF6 673 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 FAM167AQ96KS9 214 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 APOL5Q9BWW9 433 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 ZMYND12Q9H0C1 365 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 S1PR5Q9H228 398 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 NRBP2Q9NSY0 501 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 SPG21Q9NZD8 308 aa18.92■□□□□ 0.62
MRPL55-220ENST00000411464 ESYT2A0FGR8 921 aa18.91■□□□□ 0.62
MRPL55-220ENST00000411464 EIF4BP23588 611 aaKnown RBP18.91■□□□□ 0.62
MRPL55-220ENST00000411464 GNA11P29992 359 aa18.91■□□□□ 0.62
MRPL55-220ENST00000411464 METAP2P50579 478 aaKnown RBP eCLIP18.91■□□□□ 0.62
MRPL55-220ENST00000411464 KCNC3Q14003 757 aa18.91■□□□□ 0.62
MRPL55-220ENST00000411464 LRRC55Q6ZSA7 311 aa18.91■□□□□ 0.62
MRPL55-220ENST00000411464 ZBTB33Q86T24 672 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms