RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TRIM24O15164 1050 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 TNFRSF21O75509 655 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 LATS1O95835 1130 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 PAK4O96013 591 aaPredicted RBP-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 NME2P22392 152 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZBTB25P24278 435 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 L1CAMP32004 1257 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 MLLT10P55197 1068 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 GUCY1B3Q02153 619 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 NHLRC1Q6VVB1 395 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 TMC3Q7Z5M5 1100 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 DCP2Q8IU60 420 aaKnown RBP-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 SCYL1Q96KG9 808 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 UHRF1Q96T88 793 aaPredicted RBP-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 HEPHQ9BQS7 1158 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 QTRT1Q9BXR0 403 aaKnown RBP-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 SLC46A2Q9BY10 475 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 AP5M1Q9H0R1 490 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 RYR2Q92736 4967 aa-0.6□□□□□ -2.51
RNU4-88P-201ENST00000411220 SRRM2Q9UQ35 2752 aaKnown RBP-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 PMS2P1A4D2B8 440 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 USP17L5A8MUK1 530 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 SLC26A4O43511 780 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 SLITRK3O94933 977 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 SP1P08047 785 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 DUX4L4P0CJ87 422 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 POLD1P28340 1107 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 TNFRSF8P28908 595 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 MPGP29372 298 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 TRA2AQ13595 282 aaKnown RBP eCLIP-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 UBE3CQ15386 1083 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 TRIP6Q15654 476 aaKnown RBP-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 ELAVL1Q15717 326 aaKnown RBP-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 C8orf34Q49A92 452 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 PHACTR4Q8IZ21 702 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 NKD1Q969G9 470 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 PLPPR2Q96GM1 343 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 PDLIM2Q96JY6 352 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 TIMP4Q99727 224 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 RTBDNQ9BSG5 229 aaPredicted RBP-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 TMEM204Q9BSN7 226 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 CPNE5Q9HCH3 593 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 PRR34Q9NV39 138 aa-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 FN1P02751 2386 aaKnown RBP-0.61□□□□□ -2.51
RNU4-88P-201ENST00000411220 SPTBN4Q9H254 2564 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 TNFRSF10BO14763 440 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 CUTAO60888 179 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 FBXO21O94952 628 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 PRAMEF1O95521 474 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 NGFRP08138 427 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 EGR2P11161 476 aaPredicted RBP-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 VAV1P15498 845 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 PCSK2P16519 638 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 LGALS4P56470 323 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 CKAP4Q07065 602 aaKnown RBP-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 LMAN2Q12907 356 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 CAPRIN1Q14444 709 aaKnown RBP-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 MCM6Q14566 821 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 KRTAP19-7Q3SYF9 63 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 GPR149Q86SP6 731 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 KRTAP13-1Q8IUC0 172 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 ATXN2LQ8WWM7 1075 aaKnown RBP-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZNF347Q96SE7 839 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 PRSS22Q9GZN4 317 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 DHX33Q9H6R0 707 aaKnown RBP-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 LRIT1Q9P2V4 623 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 SFMBT1Q9UHJ3 866 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 RWDD3Q9Y3V2 267 aa-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 TEP1Q99973 2627 aaKnown RBP-0.62□□□□□ -2.51
RNU4-88P-201ENST00000411220 FAT1Q14517 4588 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 SRRM3A6NNA2 597 aaPredicted RBP-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 KCNU1A8MYU2 1149 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 H3BNX3 289 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 PPP6CO00743 305 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 MAN2B1O00754 1011 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 CRLF1O75462 422 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 POLR3DP05423 398 aaPredicted RBP-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 ARL14EPLP0DKL9 152 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 TNNI2P48788 182 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 LPAL2Q16609 132 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 RTP2Q5QGT7 225 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 C1QL3Q5VWW1 255 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 C16orf46Q6P387 395 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZNF549Q6P9A3 640 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 TMC5Q6UXY8 1006 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 USP30Q70CQ3 517 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 OAFQ86UD1 273 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 P2RY8Q86VZ1 359 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 KRTAP7-1Q8IUC3 87 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 FGFRL1Q8N441 504 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 FBXL16Q8N461 479 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 ASB10Q8WXI3 467 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZNF479Q96JC4 524 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 SAP130Q9H0E3 1048 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 TRNAU1APQ9NX07 287 aaKnown RBP-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 SQORQ9Y6N5 450 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 HMCN2Q8NDA2 5059 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 CREBBPQ92793 2442 aa-0.63□□□□□ -2.51
RNU4-88P-201ENST00000411220 ZFYVE26Q68DK2 2539 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms