RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 MAGEL2Q9UJ55 1249 aa3.06□□□□□ -1.92
RNU2-54P-201ENST00000410299 ASB1Q9Y576 335 aa3.06□□□□□ -1.92
RNU2-54P-201ENST00000410299 TNPO3Q9Y5L0 923 aaKnown RBP3.06□□□□□ -1.92
RNU2-54P-201ENST00000410299 HS3ST3A1Q9Y663 406 aa3.06□□□□□ -1.92
RNU2-54P-201ENST00000410299 SLC30A1Q9Y6M5 507 aa3.06□□□□□ -1.92
RNU2-54P-201ENST00000410299 DVL2O14641 736 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 PPP1R12AO14974 1030 aaPredicted RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 FZD7O75084 574 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 DNAJC8O75937 253 aaPredicted RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 NPTXRO95502 500 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 APEX1P27695 318 aaKnown RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 MSX2P35548 267 aaPredicted RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 STAT3P40763 770 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 RGS3P49796 1198 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 KIF11P52732 1056 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 ALDH6A1Q02252 535 aaKnown RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 HGFACQ04756 655 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 FOXL1Q12952 345 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 ADAM15Q13444 863 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 ACAP1Q15027 740 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 NRN1LQ496H8 165 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 USP39Q53GS9 565 aaKnown RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 IGFL4Q6B9Z1 124 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 ZCCHC8Q6NZY4 707 aaKnown RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 CC2D1AQ6P1N0 951 aaPredicted RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 MAMDC4Q6UXC1 1216 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 RNF207Q6ZRF8 634 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 POLNQ7Z5Q5 900 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 DDX53Q86TM3 631 aaKnown RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 ZNF808Q8N4W9 903 aaPredicted RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 CALML6Q8TD86 181 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 EDAQ92838 391 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 TMEM176AQ96HP8 235 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 ZNF341Q9BYN7 854 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 AGO3Q9H9G7 860 aaKnown RBP3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 PLA2G3Q9NZ20 509 aa3.05□□□□□ -1.92
RNU2-54P-201ENST00000410299 PTPDC1A2A3K4 754 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 NPIPB8E9PQR5 432 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 TRAF5O00463 557 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 SLC26A4O43511 780 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 OPA1O60313 960 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 SDSP20132 328 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 PTX3P26022 381 aaPredicted RBP3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 IGFALSP35858 605 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 RPS19P39019 145 aaKnown RBP3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 ANTXR2P58335 489 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 DGCR2P98153 550 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 ATP2C1P98194 919 aaPredicted RBP3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 SLC6A3Q01959 620 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 KLF10Q13118 480 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 FOXE3Q13461 319 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 SAFB2Q14151 953 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 ARHGAP44Q17R89 818 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 CHST14Q8NCH0 376 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 SHCBP1Q8NEM2 672 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 SH3TC2Q8TF17 1288 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 SREK1Q8WXA9 508 aaKnown RBP3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 FOXB1Q99853 325 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 ZSWIM4Q9H7M6 989 aa3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 ING1Q9UK53 422 aaPredicted RBP3.04□□□□□ -1.92
RNU2-54P-201ENST00000410299 B4E1Z4 1266 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 CYR61O00622 381 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 PRLP01236 227 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 ASLP04424 464 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 JMJD7P0C870 316 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 HIBADHP31937 336 aaKnown RBP3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 MAP3K12Q12852 859 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 RIN1Q13671 783 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 GRM7Q14831 915 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 NFE2L2Q16236 605 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 FNDC3BQ53EP0 1204 aaKnown RBP3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 PIK3R6Q5UE93 754 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 C1orf210Q8IVY1 113 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 KIAA1958Q8N8K9 716 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 OR5AN1Q8NGI8 311 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 IL17DQ8TAD2 202 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 ZNF503Q96F45 646 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 FAM89AQ96GI7 184 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 MRFAP1L1Q96HT8 127 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 MRIQ9BWK5 157 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 CSRNP2Q9H175 543 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 PCED1AQ9H1Q7 454 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 NELFAQ9H3P2 528 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 PCIF1Q9H4Z3 704 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 TLR9Q9NR96 1032 aa3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 CTDP1Q9Y5B0 961 aaPredicted RBP3.03□□□□□ -1.92
RNU2-54P-201ENST00000410299 A0A1W2PRX2 142 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 C2orf78A6NCI8 922 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 H7C1D1 291 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 CBX4O00257 560 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 MAFO75444 373 aaPredicted RBP3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 ASMTLO95671 621 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 C1SP09871 688 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 SLC9A1P19634 815 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 FNTBP49356 437 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 ADCY7P51828 1080 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 HMGA2P52926 109 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 ROM1Q03395 351 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 C21orf62-AS1Q17RA5 79 aa3.02□□□□□ -1.93
RNU2-54P-201ENST00000410299 CCDC144BQ3MJ40 725 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms