RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 TPRNQ4KMQ1 711 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 TAF2Q6P1X5 1199 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 PADI6Q6TGC4 694 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 SERINC5Q86VE9 423 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 LINC01465Q8N7H1 131 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 RETREG2Q8NC44 543 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 TRPV6Q9H1D0 765 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 ATP6V0A4Q9HBG4 840 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 PDLIM7Q9NR12 457 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 KCND2Q9NZV8 630 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 USP25Q9UHP3 1055 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 NOD1Q9Y239 953 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 ATP11BQ9Y2G3 1177 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 SMIM35A0A1B0GVV1 85 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 USO1O60763 962 aaKnown RBP18.49■□□□□ 0.55
SUMO1-208ENST00000409627 RPLP2P05387 115 aaKnown RBP18.49■□□□□ 0.55
SUMO1-208ENST00000409627 CYP2C9P11712 490 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 FAM160A1Q05DH4 1040 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 MCM6Q14566 821 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 EMC2Q15006 297 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 ZBTB10Q96DT7 871 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 MTRQ99707 1265 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 HTATIP2Q9BUP3 242 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 LMBRD1Q9NUN5 540 aa18.49■□□□□ 0.55
SUMO1-208ENST00000409627 SSBP05455 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
SUMO1-208ENST00000409627 CYP11B2P19099 503 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 RINT1Q6NUQ1 792 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 EFCAB12Q6NXP0 572 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 RUFY4Q6ZNE9 571 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 C1orf186Q6ZWK4 172 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 SV2BQ7L1I2 683 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 FMR1NBQ8N0W7 255 aaPredicted RBP18.48■□□□□ 0.55
SUMO1-208ENST00000409627 MCPH1Q8NEM0 835 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 ENGASEQ8NFI3 743 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 RUSC1Q9BVN2 902 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 TNMDQ9H2S6 317 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 XPNPEP1Q9NQW7 623 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 MYH11P35749 1972 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 TANC1Q9C0D5 1861 aa18.48■□□□□ 0.55
SUMO1-208ENST00000409627 ACTN4O43707 911 aaKnown RBP18.47■□□□□ 0.55
SUMO1-208ENST00000409627 ZNF202O95125 648 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 SLFN14P0C7P3 912 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 GUCY2CP25092 1073 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 TMOD1P28289 359 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 FAAP100Q0VG06 881 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 SNW1Q13573 536 aaKnown RBP18.47■□□□□ 0.55
SUMO1-208ENST00000409627 RPAINQ86UA6 219 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 GPBP1Q86WP2 473 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 CEP57L1Q8IYX8 460 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 METTL13Q8N6R0 699 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 TCP11Q8WWU5 503 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 DHX38Q92620 1227 aaKnown RBP18.47■□□□□ 0.55
SUMO1-208ENST00000409627 TIPINQ9BVW5 301 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 SUGCTQ9HAC7 445 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 KBTBD4Q9NVX7 518 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 SERTAD1Q9UHV2 236 aa18.47■□□□□ 0.55
SUMO1-208ENST00000409627 SIP14410 1827 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 CAND2O75155 1236 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 CLTBP09497 229 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 LIG1P18858 919 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 DNM2P50570 870 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 CLCN3P51790 818 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 RBL2Q08999 1139 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
SUMO1-208ENST00000409627 DHX8Q14562 1220 aaKnown RBP18.46■□□□□ 0.55
SUMO1-208ENST00000409627 TRIM71Q2Q1W2 868 aaKnown RBP18.46■□□□□ 0.55
SUMO1-208ENST00000409627 LONRF3Q496Y0 759 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 KIAA0319LQ8IZA0 1049 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 LRRC71Q8N4P6 559 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 CCDC155Q8N6L0 562 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 CAGE1Q8TC20 777 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 WNT8BQ93098 351 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 MAP7D2Q96T17 732 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 LRRC27Q9C0I9 530 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 BMP2KQ9NSY1 1161 aaPredicted RBP18.46■□□□□ 0.55
SUMO1-208ENST00000409627 TBX21Q9UL17 535 aa18.46■□□□□ 0.55
SUMO1-208ENST00000409627 MCM4P33991 863 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 AMPD3Q01432 767 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 DRP2Q13474 957 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 ARSHQ5FYA8 562 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 IER5Q5VY09 327 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 KRBA2Q6ZNG9 492 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 RSPH3Q86UC2 560 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 NME8Q8N427 588 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 DNAJB3Q8WWF6 145 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 TIGD1Q96MW7 591 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 FAM49AQ9H0Q0 323 aaPredicted RBP18.45■□□□□ 0.54
SUMO1-208ENST00000409627 DNAH12Q6ZR08 3092 aa18.45■□□□□ 0.54
SUMO1-208ENST00000409627 NR1I2O75469 434 aa18.44■□□□□ 0.54
SUMO1-208ENST00000409627 BFSP2Q13515 415 aa18.44■□□□□ 0.54
SUMO1-208ENST00000409627 ZNF710Q8N1W2 664 aa18.44■□□□□ 0.54
SUMO1-208ENST00000409627 CNNM3Q8NE01 707 aa18.44■□□□□ 0.54
SUMO1-208ENST00000409627 PSPC1Q8WXF1 523 aaKnown RBP18.44■□□□□ 0.54
SUMO1-208ENST00000409627 TMEM143Q96AN5 459 aa18.44■□□□□ 0.54
SUMO1-208ENST00000409627 POLR3FQ9H1D9 316 aaPredicted RBP18.44■□□□□ 0.54
SUMO1-208ENST00000409627 SUCLA2Q9P2R7 463 aaPredicted RBP18.44■□□□□ 0.54
SUMO1-208ENST00000409627 ODF2LQ9ULJ1 636 aa18.44■□□□□ 0.54
SUMO1-208ENST00000409627 MYMKA6NI61 221 aa18.43■□□□□ 0.54
SUMO1-208ENST00000409627 PITPNM1O00562 1244 aa18.43■□□□□ 0.54
SUMO1-208ENST00000409627 KIAA0355O15063 1070 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms