RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NHSL1Q5SYE7 1610 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 RPA1P27694 616 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 KCNH2Q12809 1159 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 XXYLT1Q8NBI6 393 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 MKL1Q969V6 931 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 NT5C1BQ96P26 610 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 JPH2Q9BR39 696 aaPredicted RBP12.41□□□□□ -0.42
SNX13-202ENST00000409604 BTBD7Q9P203 1132 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 RWDD2AQ9UIY3 292 aa12.41□□□□□ -0.42
SNX13-202ENST00000409604 ESYT2A0FGR8 921 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 TFRCP02786 760 aaKnown RBP12.4□□□□□ -0.42
SNX13-202ENST00000409604 ACTN1P12814 892 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 ITGB5P18084 799 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 EMC2Q15006 297 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 MAN2A1Q16706 1144 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 GMLQ99445 158 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.4□□□□□ -0.42
SNX13-202ENST00000409604 CYP39A1Q9NYL5 469 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 PNMA6AP0CW24 399 aaPredicted RBP12.4□□□□□ -0.42
SNX13-202ENST00000409604 MRPS25P82663 173 aaKnown RBP12.4□□□□□ -0.42
SNX13-202ENST00000409604 GSTA5Q7RTV2 222 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 HACE1Q8IYU2 909 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 TMEM206Q9H813 350 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 FAM208AQ9UK61 1670 aaKnown RBP12.4□□□□□ -0.42
SNX13-202ENST00000409604 CTAGE9A4FU28 777 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 KLRC1P26715 233 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 VPS41P49754 854 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 IFT81Q8WYA0 676 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 PI4K2AQ9BTU6 479 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 IKZF4Q9H2S9 585 aa12.4□□□□□ -0.42
SNX13-202ENST00000409604 METTL14Q9HCE5 456 aaKnown RBP12.4□□□□□ -0.42
SNX13-202ENST00000409604 CACNA1FO60840 1977 aa12.4□□□□□ -0.43
SNX13-202ENST00000409604 TISP43B9A030 160 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 TLR3O15455 904 aaKnown RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 IGSF3O75054 1194 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 GCLCP48506 637 aaPredicted RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 ALDH5A1P51649 535 aaPredicted RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 ZNF280AP59817 542 aaPredicted RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 GPS2Q13227 327 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 RINT1Q6NUQ1 792 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 CCDC25Q86WR0 208 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 OR6B3Q8NGW1 331 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 RABGGTAQ92696 567 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 MRRFQ96E11 262 aaKnown RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 RNF208Q9H0X6 261 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 SMARCAD1Q9H4L7 1026 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 MAGEF1Q9HAY2 307 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 THAP12O43422 761 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 CXCR5P32302 372 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 SLC8A3P57103 927 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 TNNC1P63316 161 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 FUT2Q10981 343 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 PPIL2Q13356 520 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 GIMAP8Q8ND71 665 aaPredicted RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 CCDC94Q9BW85 323 aaPredicted RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 PPP1R12CQ9BZL4 782 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 MROH8Q9H579 483 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 PLCH1Q4KWH8 1693 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 H3BRB1 525 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 CEP104O60308 925 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 CYP11B2P19099 503 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 RGS2P41220 211 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 NUMBP49757 651 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 KLK7P49862 253 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 CCDC144BQ3MJ40 725 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 LRRC8AQ8IWT6 810 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 GOLGA5Q8TBA6 731 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 PRPF31Q8WWY3 499 aaKnown RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 WDR18Q9BV38 432 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 TUT1Q9H6E5 874 aaKnown RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 BCAS3Q9H6U6 928 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 CHORDC1Q9UHD1 332 aaPredicted RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 GNA14O95837 355 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 THPOP40225 353 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 PRPHP41219 470 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 PHKA2P46019 1235 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 KCNA1Q09470 495 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 EPC2Q52LR7 807 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNX13-202ENST00000409604 CAPNS2Q96L46 248 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 GLT1D1Q96MS3 346 aa12.39□□□□□ -0.43
SNX13-202ENST00000409604 POP1Q99575 1024 aaKnown RBP12.39□□□□□ -0.43
SNX13-202ENST00000409604 MANSC4A6NHS7 340 aaPredicted RBP12.38□□□□□ -0.43
SNX13-202ENST00000409604 SMIM23A6NLE4 172 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 PRKCBP05771 671 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 SMARCA1P28370 1054 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 FLT3LGP49771 235 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 DPYDQ12882 1025 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 BFSP1Q12934 665 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 KLHL7Q8IXQ5 586 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 ENGASEQ8NFI3 743 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 ZC3H15Q8WU90 426 aaKnown RBP12.38□□□□□ -0.43
SNX13-202ENST00000409604 ANKRD36BP1Q96IX9 119 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 OSMRQ99650 979 aa12.38□□□□□ -0.43
SNX13-202ENST00000409604 RBAKQ9NYW8 714 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms