RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 PPP1R16BQ96T49 567 aa19.26■□□□□ 0.67
SCRN1-203ENST00000409570 ELAC1Q9H777 363 aaKnown RBP19.26■□□□□ 0.67
SCRN1-203ENST00000409570 ATP6V0A4Q9HBG4 840 aa19.26■□□□□ 0.67
SCRN1-203ENST00000409570 VPS13AQ96RL7 3174 aa19.26■□□□□ 0.67
SCRN1-203ENST00000409570 DMDP11532 3685 aa19.26■□□□□ 0.67
SCRN1-203ENST00000409570 H0Y858 1186 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 DDX39AO00148 427 aaKnown RBP19.25■□□□□ 0.67
SCRN1-203ENST00000409570 BACH1O14867 736 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 ATP4AP20648 1035 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 CRYBB1P53674 252 aaPredicted RBP19.25■□□□□ 0.67
SCRN1-203ENST00000409570 KIZQ2M2Z5 673 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 ZNF484Q5JVG2 852 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 LRRC55Q6ZSA7 311 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 FANCBQ8NB91 859 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 OSMRQ99650 979 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 TCF25Q9BQ70 676 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 ANO3Q9BYT9 981 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 RIC8AQ9NPQ8 531 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 ENTPD7Q9NQZ7 604 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 RNF19AQ9NV58 838 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 CDH22Q9UJ99 828 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 SLC12A7Q9Y666 1083 aa19.25■□□□□ 0.67
SCRN1-203ENST00000409570 GPR32O75388 356 aa19.24■□□□□ 0.67
SCRN1-203ENST00000409570 HOXB8P17481 243 aaPredicted RBP19.24■□□□□ 0.67
SCRN1-203ENST00000409570 FAM160B1Q5W0V3 765 aa19.24■□□□□ 0.67
SCRN1-203ENST00000409570 ZBTB33Q86T24 672 aa19.24■□□□□ 0.67
SCRN1-203ENST00000409570 CASD1Q96PB1 797 aa19.24■□□□□ 0.67
SCRN1-203ENST00000409570 LRRC2Q9BYS8 371 aa19.24■□□□□ 0.67
SCRN1-203ENST00000409570 TMEM117Q9H0C3 514 aa19.24■□□□□ 0.67
SCRN1-203ENST00000409570 NGRNQ9NPE2 291 aaKnown RBP19.24■□□□□ 0.67
SCRN1-203ENST00000409570 PUF60Q9UHX1 559 aaKnown RBP19.24■□□□□ 0.67
SCRN1-203ENST00000409570 CNTNAP5Q8WYK1 1306 aa19.24■□□□□ 0.67
SCRN1-203ENST00000409570 C22orf31O95567 290 aa19.23■□□□□ 0.67
SCRN1-203ENST00000409570 FOSP01100 380 aaPredicted RBP19.23■□□□□ 0.67
SCRN1-203ENST00000409570 NUBP1P53384 320 aa19.23■□□□□ 0.67
SCRN1-203ENST00000409570 NAPAP54920 295 aa19.23■□□□□ 0.67
SCRN1-203ENST00000409570 PDXDC2PQ6P474 469 aa19.23■□□□□ 0.67
SCRN1-203ENST00000409570 KCNT2Q6UVM3 1135 aa19.23■□□□□ 0.67
SCRN1-203ENST00000409570 KREMEN2Q8NCW0 462 aa19.23■□□□□ 0.67
SCRN1-203ENST00000409570 ZNF302Q9NR11 478 aa19.23■□□□□ 0.67
SCRN1-203ENST00000409570 PROB1E7EW31 1015 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 DHX15O43143 795 aaKnown RBP19.22■□□□□ 0.67
SCRN1-203ENST00000409570 GALR2O43603 387 aaPredicted RBP19.22■□□□□ 0.67
SCRN1-203ENST00000409570 VTNP04004 478 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 SREBF1P36956 1147 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 PBX3P40426 434 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 SWSAP1Q6NVH7 229 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 NIPA1Q7RTP0 329 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 MICU3Q86XE3 530 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 TEX2Q8IWB9 1127 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 ZNF558Q96NG5 402 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 NR2E1Q9Y466 385 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 DENND4AQ7Z401 1863 aa19.22■□□□□ 0.67
SCRN1-203ENST00000409570 C2CD4DB7Z1M9 353 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 SLC27A2O14975 620 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 BRD1O95696 1058 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 PPM1AP35813 382 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 CLK2P49760 499 aaKnown RBP19.21■□□□□ 0.67
SCRN1-203ENST00000409570 ADCY7P51828 1080 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 PPP1R18Q6NYC8 613 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 MIS18BP1Q6P0N0 1132 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 TMC7Q7Z402 723 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 SGMS1Q86VZ5 419 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 LRRC43Q8N309 656 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 CASP10Q92851 521 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 POMKQ9H5K3 350 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 SORCS3Q9UPU3 1222 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 HCFC2Q9Y5Z7 792 aa19.21■□□□□ 0.67
SCRN1-203ENST00000409570 FAM86B1E9PN63 330 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 HOXA2O43364 376 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 FAM86B2P0C5J1 330 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 ZNF76P36508 570 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 FUT2Q10981 343 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 AP3B2Q13367 1082 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 TPRNQ4KMQ1 711 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 PLA2G4DQ86XP0 818 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 UBALD2Q8IYN6 164 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 METTL13Q8N6R0 699 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 TMEM105Q8N8V8 129 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 BBXQ8WY36 941 aaPredicted RBP19.2■□□□□ 0.66
SCRN1-203ENST00000409570 LSG1Q9H089 658 aaKnown RBP19.2■□□□□ 0.66
SCRN1-203ENST00000409570 ADAM7Q9H2U9 754 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 SPG21Q9NZD8 308 aa19.2■□□□□ 0.66
SCRN1-203ENST00000409570 MAFBQ9Y5Q3 323 aaPredicted RBP19.2■□□□□ 0.66
SCRN1-203ENST00000409570 IGLV3-22A0A075B6J6 115 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 SMCO2A6NFE2 343 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 C2orf71A6NGG8 1288 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 KRT17Q04695 432 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 MTMR3Q13615 1198 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 CLLU1OSQ5K130 101 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 ASCL5Q7RTU5 278 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 ECHDC2Q86YB7 292 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 SLC39A11Q8N1S5 342 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 MRPL43Q8N983 215 aaKnown RBP19.19■□□□□ 0.66
SCRN1-203ENST00000409570 NECTIN4Q96NY8 510 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 SMOC2Q9H3U7 446 aa19.19■□□□□ 0.66
SCRN1-203ENST00000409570 GVINP1Q7Z2Y8 2422 aa19.18■□□□□ 0.66
SCRN1-203ENST00000409570 IPO5O00410 1097 aaKnown RBP19.18■□□□□ 0.66
SCRN1-203ENST00000409570 CLASP2O75122 1294 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms