RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SPATA33Q96N06 139 aa15.52■□□□□ 0.08
GPNMB-203ENST00000409458 ZFYVE28Q9HCC9 887 aa15.52■□□□□ 0.08
GPNMB-203ENST00000409458 CYP26B1Q9NR63 512 aa15.52■□□□□ 0.08
GPNMB-203ENST00000409458 DOCK3Q8IZD9 2030 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 UBE4BO95155 1302 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 K7ENM7 598 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 TOMM70O94826 608 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 FGFR1OPO95684 399 aaKnown RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 PLS3P13797 630 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 FKBP3Q00688 224 aaKnown RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 MTERF2Q49AM1 385 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 KSR1Q8IVT5 923 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 DHX37Q8IY37 1157 aaKnown RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 DRC1Q96MC2 740 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 TUBGCP2Q9BSJ2 902 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 STRA6Q9BX79 667 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 RBM47A0AV96 593 aaKnown RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 LGALS16A8MUM7 142 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 NOP56O00567 594 aaKnown RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 LGR5O75473 907 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 PPP1R37O75864 691 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 MTIF2P46199 727 aaKnown RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 TM4SF4P48230 202 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 STAT5BP51692 787 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 SOX10P56693 466 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 GSDMDP57764 484 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 ARHGAP1Q07960 439 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 EDRF1Q3B7T1 1238 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 GJC2Q5T442 439 aaPredicted RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 FAM160B1Q5W0V3 765 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 SPECC1LQ69YQ0 1117 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 TRIM50Q86XT4 487 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 TINF2Q9BSI4 451 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 IKZF4Q9H2S9 585 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 ATP6V0A4Q9HBG4 840 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 XPNPEP1Q9NQW7 623 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 PDLIM7Q9NR12 457 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 TYW1Q9NV66 732 aaKnown RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 LARSQ9P2J5 1176 aaKnown RBP15.51■□□□□ 0.07
GPNMB-203ENST00000409458 TRAF3IP3Q9Y228 551 aa15.51■□□□□ 0.07
GPNMB-203ENST00000409458 ZSWIM8A7E2V4 1837 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 CALUO43852 315 aaPredicted RBP15.5■□□□□ 0.07
GPNMB-203ENST00000409458 DGAT1O75907 488 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 MAPTP10636 758 aaKnown RBP15.5■□□□□ 0.07
GPNMB-203ENST00000409458 PRKCSHP14314 528 aaPredicted RBP15.5■□□□□ 0.07
GPNMB-203ENST00000409458 ADCYAP1R1P41586 468 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 MAP2K5Q13163 448 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 TBX2Q13207 712 aaPredicted RBP15.5■□□□□ 0.07
GPNMB-203ENST00000409458 MIIPQ5JXC2 388 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 ARMCX5Q6P1M9 558 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 LRRC8AQ8IWT6 810 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 CEP63Q96MT8 703 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 MGAMO43451 1857 aa15.5■□□□□ 0.07
GPNMB-203ENST00000409458 EMSYQ7Z589 1322 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.49■□□□□ 0.07
GPNMB-203ENST00000409458 PDXKO00764 312 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 TGFB1I1O43294 461 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 NR2F2P24468 414 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 NCKAP1LP55160 1127 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 GOLGA8FQ08AF8 430 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 GOLGA8DPQ0D2H9 430 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 STXBP4Q6ZWJ1 553 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 CCDC150Q8NCX0 1101 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 BSNDQ8WZ55 320 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 CEP89Q96ST8 783 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 NIFKQ9BYG3 293 aaKnown RBP15.49■□□□□ 0.07
GPNMB-203ENST00000409458 AZI2Q9H6S1 392 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 SLC5A4Q9NY91 659 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 ZHX1Q9UKY1 873 aaPredicted RBP15.49■□□□□ 0.07
GPNMB-203ENST00000409458 PYCARDQ9ULZ3 195 aa15.49■□□□□ 0.07
GPNMB-203ENST00000409458 ITIH6Q6UXX5 1313 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 MSNP26038 577 aaKnown RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 MARK3P27448 753 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 PEX3P56589 373 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 UBXN1Q04323 297 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 EMC2Q15006 297 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 MCPH1Q8NEM0 835 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 USP6NLQ92738 828 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 KIFAP3Q92845 792 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 NOC4LQ9BVI4 516 aaKnown RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 FLRT1Q9NZU1 646 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 PES1O00541 588 aaKnown RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 SLC16A4O15374 487 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 CA12O43570 354 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 AOC2O75106 756 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 GH1P01241 217 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 NR3C1P04150 777 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 CTGFP29279 349 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 POLGP54098 1239 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 DMP1Q13316 513 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 ADAM9Q13443 819 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 ACVR2BQ13705 512 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 ALCAMQ13740 583 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 TARBP2Q15633 366 aaKnown RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 CCDC40Q4G0X9 1142 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 CEP135Q66GS9 1140 aa15.48■□□□□ 0.07
GPNMB-203ENST00000409458 MSL3Q8N5Y2 521 aaKnown RBP15.48■□□□□ 0.07
GPNMB-203ENST00000409458 GLG1Q92896 1179 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms