RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 GDAQ9Y2T3 454 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 PEX3P56589 373 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 TFAMQ00059 246 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 LRRC63Q05C16 580 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 SETDB1Q15047 1291 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PPP4R3CPQ6ZMV5 832 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 RBM43Q6ZSC3 357 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 SGMS1Q86VZ5 419 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 DHX40Q8IX18 779 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 GIMAP8Q8ND71 665 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 RIN2Q8WYP3 895 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ZNF653Q96CK0 615 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 OTUD5Q96G74 571 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 RPGRIP1Q96KN7 1286 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 GDAP1L1Q96MZ0 367 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 YIPF2Q9BWQ6 316 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ZNF302Q9NR11 478 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 LRFN2Q9ULH4 789 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ZNRF3Q9ULT6 936 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 MGAMO43451 1857 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 POTEB3A0JP26 581 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 POTECB2RU33 542 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ENC1O14682 589 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 SEC31AO94979 1220 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 SERPING1P05155 500 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 H2AFZP0C0S5 128 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PTPREP23469 700 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 OAS2P29728 719 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 C2orf54Q08AI8 447 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ORC2Q13416 577 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 R3HDM1Q15032 1099 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 EZH2Q15910 746 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 BSPRYQ5W0U4 402 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 RSBN1LQ6PCB5 846 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 POTEBQ6S5H4 581 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 C16orf86Q6ZW13 317 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 H2AFVQ71UI9 128 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PHLDB2Q86SQ0 1253 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 TCP11Q8WWU5 503 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 TRIM11Q96F44 468 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 NLRP4Q96MN2 994 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 SMC6Q96SB8 1091 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 KRT12Q99456 494 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 MTRQ99707 1265 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 MIS12Q9H081 205 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 DPH5Q9H2P9 285 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 RNF146Q9NTX7 359 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 STIM2Q9P246 746 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ZNF70Q9UC06 446 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PTPN22Q9Y2R2 807 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PCDHA13Q9Y5I0 950 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ARHGAP23Q9P227 1491 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 RGPD8O14715 1765 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 F5H6K3 240 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 XPOTO43592 962 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 TDP2O95551 362 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ATF2P15336 505 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 BPIFB4P59827 614 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ARHGAP4P98171 946 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 FKBP3Q00688 224 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 KLRC3Q07444 240 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 MESDQ14696 234 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 SBK1Q52WX2 424 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 RINT1Q6NUQ1 792 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 METTL23Q86XA0 190 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 SLC35F6Q8N357 371 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 TAB3Q8N5C8 712 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 NEDD1Q8NHV4 660 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 BPIFA3Q9BQP9 254 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PHF20Q9BVI0 1012 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ELP3Q9H9T3 547 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 RPF1Q9H9Y2 349 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 HERC5Q9UII4 1024 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 AFDNP55196 1824 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 FAM208AQ9UK61 1670 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PHLPP2Q6ZVD8 1323 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 POTEFA5A3E0 1075 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 A6NJR5 290 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PP2D1A8MPX8 630 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 EFCAB8A8MWE9 144 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 TP73O15350 636 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 MED7O43513 233 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 POTEIP0CG38 1075 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 DPEP1P16444 411 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 CD58P19256 250 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 POLR2BP30876 1174 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 CTNNA1P35221 906 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 KIF11P52732 1056 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 EHHADHQ08426 723 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ITKQ08881 620 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 TTBK2Q6IQ55 1244 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 POTEGQ6S5H5 508 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 POTEEQ6S8J3 1075 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 PADI6Q6TGC4 694 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 INTS8Q75QN2 995 aaKnown RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 FBXO33Q7Z6M2 555 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 FMR1NBQ8N0W7 255 aaPredicted RBP4.1□□□□□ -1.75
RGPD4-201ENST00000408999 NME8Q8N427 588 aa4.1□□□□□ -1.75
RGPD4-201ENST00000408999 ANKRD13CQ8N6S4 541 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms