RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 TCP11Q8WWU5 503 aa14.45□□□□□ -0.1
SNORD88B-201ENST00000408454 NLRP7Q8WX94 980 aa14.45□□□□□ -0.1
SNORD88B-201ENST00000408454 CDCA3Q99618 268 aaPredicted RBP14.45□□□□□ -0.1
SNORD88B-201ENST00000408454 ADAM2Q99965 735 aa14.45□□□□□ -0.1
SNORD88B-201ENST00000408454 SEPT9Q9UHD8 586 aaPredicted RBP14.45□□□□□ -0.1
SNORD88B-201ENST00000408454 ST3GAL5Q9UNP4 418 aa14.45□□□□□ -0.1
SNORD88B-201ENST00000408454 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 EPOPA6NHQ4 379 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 MSH4O15457 936 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 CHMP2AO43633 222 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 PFKFB2O60825 505 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 EOMESO95936 686 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 ALADP13716 330 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 KCNA5P22460 613 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 KRT2P35908 639 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 STK3Q13188 491 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 EP400NLQ6ZTU2 488 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 LRRC43Q8N309 656 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 TRAPPC12Q8WVT3 735 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 AGO3Q9H9G7 860 aaKnown RBP14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 ERVK-5Q9HDB9 667 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 COL4A4P53420 1690 aaPredicted RBP14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 DOCK5Q9H7D0 1870 aa14.44□□□□□ -0.1
SNORD88B-201ENST00000408454 ASAP2O43150 1006 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 PSMD10O75832 226 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 P4HBP07237 508 aaKnown RBP14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 RFC5P40937 340 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 QARSP47897 775 aaKnown RBP14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 NLRP11P59045 1033 aaKnown RBP14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 COL9A3Q14050 684 aaPredicted RBP14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 KIZQ2M2Z5 673 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 TCTN1Q2MV58 587 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 LETM2Q2VYF4 491 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 HACE1Q8IYU2 909 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 TMEM87AQ8NBN3 555 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 RASGRP4Q8TDF6 673 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 NIFKQ9BYG3 293 aaKnown RBP14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 TMEM117Q9H0C3 514 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 ORC3Q9UBD5 711 aaPredicted RBP14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 LZTS1Q9Y250 596 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 COL6A3P12111 3177 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 CUL9Q8IWT3 2517 aa14.43□□□□□ -0.1
SNORD88B-201ENST00000408454 CCNT1O60563 726 aaKnown RBP14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 TFF2Q03403 129 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 PPP2R5CQ13362 524 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 ORC2Q13416 577 aaPredicted RBP14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 PTCRAQ6ISU1 281 aaPredicted RBP14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 ELMSAN1Q6PJG2 1045 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 SKAP1Q86WV1 359 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 THNSL1Q8IYQ7 743 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 LENG9Q96B70 501 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 PGBD4Q96DM1 585 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 MBOAT7Q96N66 472 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 OSMRQ99650 979 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 PHF20Q9BVI0 1012 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 UPF2Q9HAU5 1272 aaKnown RBP14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 RC3H2Q9HBD1 1191 aaKnown RBP14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 CLDND1Q9NY35 253 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 HCN4Q9Y3Q4 1203 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 NOC2LQ9Y3T9 749 aaKnown RBP14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 STK24Q9Y6E0 443 aa14.42□□□□□ -0.1
SNORD88B-201ENST00000408454 MYO9BQ13459 2157 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 ARHGEF15O94989 841 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 DARSP14868 501 aaKnown RBP14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 SSTR3P32745 418 aaPredicted RBP14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 POLGP54098 1239 aaPredicted RBP14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 GIT2Q14161 759 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 INF2Q27J81 1249 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 CNNM3Q8NE01 707 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 MICAL1Q8TDZ2 1067 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 PSPC1Q8WXF1 523 aaKnown RBP14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 ZNF558Q96NG5 402 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 UNC45AQ9H3U1 944 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 ZSWIM4Q9H7M6 989 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 NGRNQ9NPE2 291 aaKnown RBP14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 PLAGL2Q9UPG8 496 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 TELO2Q9Y4R8 837 aa14.41□□□□□ -0.1
SNORD88B-201ENST00000408454 TBKBP1A7MCY6 615 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 DDX11L8A8MPP1 907 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 C9IYK1 514 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 VTNP04004 478 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 NDUFV1P49821 464 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 GPC3P51654 580 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 KCNQ1P51787 676 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 CLCN3P51790 818 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 HMGN5P82970 282 aaKnown RBP14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 SCRN1Q12765 414 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 GNL2Q13823 731 aaKnown RBP14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 TFDP1Q14186 410 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 MXD4Q14582 209 aaPredicted RBP14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 EPHA7Q15375 998 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 MTERF2Q49AM1 385 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 TCEAL5Q5H9L2 206 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 GLB1LQ6UWU2 654 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 TRMT1LQ7Z2T5 733 aaKnown RBP14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 ZSCAN31Q96LW9 406 aaPredicted RBP14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 TRAIPQ9BWF2 469 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 UBN1Q9NPG3 1134 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 TLR9Q9NR96 1032 aa14.4□□□□□ -0.1
SNORD88B-201ENST00000408454 ARIH1Q9Y4X5 557 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms