RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 UIMC1Q96RL1 719 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 INO80BQ9C086 356 aaPredicted RBP10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 RC3H2Q9HBD1 1191 aaKnown RBP10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 ERVK-5Q9HDB9 667 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 KCNJ14Q9UNX9 436 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 FAM50BQ9Y247 325 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 PCDHB7Q9Y5E2 793 aa10.21□□□□□ -0.77
SNORD88A-201ENST00000408314 PRUNE2Q8WUY3 3088 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 FSD2A1L4K1 749 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 CARNS1A5YM72 827 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 TNFRSF10AO00220 468 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 GAS2O43903 313 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 CCNT1O60563 726 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 EIF4BP23588 611 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 BMPR1AP36894 532 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 QARSP47897 775 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 CLCN3P51790 818 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 PPP2R5CQ13362 524 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 KIZQ2M2Z5 673 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 PUS10Q3MIT2 529 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 TRMT1LQ7Z2T5 733 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 NLRC5Q86WI3 1866 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 NEK9Q8TD19 979 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 ADAMTS19Q8TE59 1207 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 SLC7A3Q8WY07 619 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 ZNF689Q96CS4 500 aaPredicted RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 ZBTB10Q96DT7 871 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 ZSCAN31Q96LW9 406 aaPredicted RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 UHRF1Q96T88 793 aaPredicted RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 OSMRQ99650 979 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 LLPHQ9BRT6 129 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 NIFKQ9BYG3 293 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 NSUN3Q9H649 340 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 ELAC1Q9H777 363 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 UPF2Q9HAU5 1272 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 KCNMB3Q9NPA1 279 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 PRDM6Q9NQX0 595 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 SH2B1Q9NRF2 756 aaPredicted RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 RGS18Q9NS28 235 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 DACT1Q9NYF0 836 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 ST3GAL5Q9UNP4 418 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 NOC2LQ9Y3T9 749 aaKnown RBP10.2□□□□□ -0.78
SNORD88A-201ENST00000408314 EYSQ5T1H1 3165 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 ZNF862O60290 1169 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 MMP1P03956 469 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 VTNP04004 478 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 P4HBP07237 508 aaKnown RBP10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 SFPQP23246 707 aaKnown RBP eCLIP10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 RFC5P40937 340 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 NLRP11P59045 1033 aaKnown RBP10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 HMGN5P82970 282 aaKnown RBP10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 ME3Q16798 604 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 TMEM266Q2M3C6 531 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 MTERF2Q49AM1 385 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 B3GNT9Q6UX72 402 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 OTUD6AQ7L8S5 288 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 ZNF410Q86VK4 478 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 ABI1Q8IZP0 508 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 LINC01465Q8N7H1 131 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 NSUN7Q8NE18 718 aaKnown RBP10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 LINC01599Q8WXQ3 324 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 CCDC43Q96MW1 224 aaKnown RBP10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 ADAM2Q99965 735 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 GCOM2Q9BZD3 368 aaPredicted RBP10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 OSBPL7Q9BZF2 842 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 ATP6V0A4Q9HBG4 840 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 TMEM161AQ9NX61 479 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 KIF3AQ9Y496 699 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 PCDHB12Q9Y5F1 795 aa10.19□□□□□ -0.78
SNORD88A-201ENST00000408314 EVPLQ92817 2033 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 WDR81Q562E7 1941 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 DDX11L8A8MPP1 907 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 SLC37A4O43826 429 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 NEMFO60524 1076 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 GPR32O75388 356 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 MAFO75444 373 aaPredicted RBP10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 CTDNEP1O95476 244 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 SKIP12755 728 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 GPC3P51654 580 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 POLGP54098 1239 aaPredicted RBP10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 UBE3AQ05086 875 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 ORC2Q13416 577 aaPredicted RBP10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 EPHA7Q15375 998 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 TARBP2Q15633 366 aaKnown RBP10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 UGCGQ16739 394 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 SPOUT1Q5T280 376 aaKnown RBP10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 KRT40Q6A162 431 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 SPRED2Q7Z698 418 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 FAM228AQ86W67 206 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 DIS3L2Q8IYB7 885 aaKnown RBP10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 LRRC71Q8N4P6 559 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 NECAB1Q8N987 351 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 TMEM40Q8WWA1 233 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 TCP11Q8WWU5 503 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 TMX1Q9H3N1 280 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 ZSWIM4Q9H7M6 989 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 UBE2ZQ9H832 354 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms