RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 FAM161BQ96MY7 647 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 TRPV6Q9H1D0 765 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ADAM22Q9P0K1 906 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 STRIP2Q9ULQ0 834 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ATP7BP35670 1465 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 USP27XA6NNY8 438 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 CALB1P05937 261 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 KRT4P19013 534 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ARL13BQ3SXY8 428 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 HP1BP3Q5SSJ5 553 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 TMEM35BQ8NCS4 154 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 GOLPH3LQ9H4A5 285 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 G3BP2Q9UN86 482 aaKnown RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 RSRC2Q7L4I2 434 aaKnown RBP13.85□□□□□ -0.19
RNF43-201ENST00000407977 ATP11CQ8NB49 1132 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 FAM167BQ9BTA0 163 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 WWP1Q9H0M0 922 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 LRRC4Q9HBW1 653 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 PSMA2P25787 234 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 COPS2P61201 443 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 NFRKBQ6P4R8 1299 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 ARMCX2Q7L311 632 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 LCORLQ8N3X6 602 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 SNF8Q96H20 258 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 FIS1Q9Y3D6 152 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 CSADQ9Y600 493 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 RNF103-CHMP3A0A140T963 221 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 TFAMQ00059 246 aaKnown RBP13.85□□□□□ -0.19
RNF43-201ENST00000407977 MAPRE2Q15555 327 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 SYDE1Q6ZW31 735 aaPredicted RBP13.85□□□□□ -0.19
RNF43-201ENST00000407977 SPATA21Q7Z572 469 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 APLFQ8IW19 511 aaPredicted RBP13.85□□□□□ -0.19
RNF43-201ENST00000407977 BRIP1Q9BX63 1249 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 DHX36Q9H2U1 1008 aaKnown RBP13.85□□□□□ -0.19
RNF43-201ENST00000407977 PPCSQ9HAB8 311 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 SERPINB13Q9UIV8 391 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 MYBL1P10243 752 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 IL6STP40189 918 aaPredicted RBP13.85□□□□□ -0.19
RNF43-201ENST00000407977 PRCPP42785 496 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 KIF19Q2TAC6 998 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 AIFM3Q96NN9 605 aa13.85□□□□□ -0.19
RNF43-201ENST00000407977 TTC26A0AVF1 554 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 SYF2O95926 243 aaKnown RBP13.84□□□□□ -0.19
RNF43-201ENST00000407977 ELF1P32519 619 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 VSNL1P62760 191 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 LLGL1Q15334 1064 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 PDXDC1Q6P996 788 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 GUF1Q8N442 669 aaKnown RBP13.84□□□□□ -0.19
RNF43-201ENST00000407977 DNAJC17Q9NVM6 304 aaKnown RBP13.84□□□□□ -0.19
RNF43-201ENST00000407977 CPSF3Q9UKF6 684 aaKnown RBP13.84□□□□□ -0.19
RNF43-201ENST00000407977 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 PPIP5K2O43314 1243 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 BMP3P12645 472 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 NOP14P78316 857 aaKnown RBP13.84□□□□□ -0.19
RNF43-201ENST00000407977 FBXL5Q9UKA1 691 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 SMG5Q9UPR3 1016 aaKnown RBP13.84□□□□□ -0.19
RNF43-201ENST00000407977 LPXNO60711 386 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 GFPT1Q06210 699 aaPredicted RBP13.84□□□□□ -0.19
RNF43-201ENST00000407977 KLC1Q07866 573 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 SLC30A9Q6PML9 568 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 KCNV2Q8TDN2 545 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 SNX12Q9UMY4 172 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 ATP8B3O60423 1300 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 SASH1O94885 1247 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 IFNA8P32881 189 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 METTL23Q86XA0 190 aa13.84□□□□□ -0.19
RNF43-201ENST00000407977 DDX47Q9H0S4 455 aaKnown RBP13.84□□□□□ -0.19
RNF43-201ENST00000407977 INO80B-WBP1J3KQ70 363 aa13.83□□□□□ -0.19
RNF43-201ENST00000407977 MEIS1O00470 390 aa13.83□□□□□ -0.19
RNF43-201ENST00000407977 E2F6O75461 281 aa13.83□□□□□ -0.19
RNF43-201ENST00000407977 AP1B1Q10567 949 aa13.83□□□□□ -0.19
RNF43-201ENST00000407977 SLC12A1Q13621 1099 aa13.83□□□□□ -0.19
RNF43-201ENST00000407977 C4orf50Q6ZRC1 276 aa13.83□□□□□ -0.19
RNF43-201ENST00000407977 ORAI2Q96SN7 254 aa13.83□□□□□ -0.19
RNF43-201ENST00000407977 INO80BQ9C086 356 aaPredicted RBP13.83□□□□□ -0.19
RNF43-201ENST00000407977 CXorf56Q9H5V9 222 aa13.83□□□□□ -0.19
RNF43-201ENST00000407977 ASAP2O43150 1006 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 NR3C1P04150 777 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 CCND1P24385 295 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 KCNH2Q12809 1159 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 NAA30Q147X3 362 aaPredicted RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 GSPT2Q8IYD1 628 aaKnown RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 RFFLQ8WZ73 363 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 ADD3Q9UEY8 706 aaKnown RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 SATB2Q9UPW6 733 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 HNRNPCP07910 306 aaKnown RBP eCLIP13.83□□□□□ -0.24e-8■■□□□ 11.8
RNF43-201ENST00000407977 YWHAHQ04917 246 aaPredicted RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 PFKFB3Q16875 520 aaPredicted RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 ZNF473Q8WTR7 871 aaKnown RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 FAM193BQ96PV7 902 aaPredicted RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 MTRQ99707 1265 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 ASNSD1Q9NWL6 643 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 SEL1LQ9UBV2 794 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 TRAF3IP3Q9Y228 551 aa13.83□□□□□ -0.2
RNF43-201ENST00000407977 ZBTB24O43167 697 aaPredicted RBP13.83□□□□□ -0.2
RNF43-201ENST00000407977 APOA1P02647 267 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms