RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 ZMYND12Q9H0C1 365 aa14.64□□□□□ -0.07
PRAME-206ENST00000406503 LRFN2Q9ULH4 789 aa14.64□□□□□ -0.07
PRAME-206ENST00000406503 PLXNA3P51805 1871 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 FSCN2O14926 492 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 PER2O15055 1255 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 FGFR1P11362 822 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 ZNF76P36508 570 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 CRYBB1P53674 252 aaPredicted RBP14.63□□□□□ -0.07
PRAME-206ENST00000406503 APOBRQ0VD83 1088 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 MIS18BP1Q6P0N0 1132 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 LRRC55Q6ZSA7 311 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 SLC24A5Q71RS6 500 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 COLGALT1Q8NBJ5 622 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 RASGRP4Q8TDF6 673 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 BBXQ8WY36 941 aaPredicted RBP14.63□□□□□ -0.07
PRAME-206ENST00000406503 KCNB2Q92953 911 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 UPF3BQ9BZI7 483 aaKnown RBP14.63□□□□□ -0.07
PRAME-206ENST00000406503 C1orf112Q9NSG2 853 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 TYW1Q9NV66 732 aaKnown RBP14.63□□□□□ -0.07
PRAME-206ENST00000406503 USP15Q9Y4E8 981 aaPredicted RBP14.63□□□□□ -0.07
PRAME-206ENST00000406503 PCDHB7Q9Y5E2 793 aa14.63□□□□□ -0.07
PRAME-206ENST00000406503 CACNA1HO95180 2353 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 ZNF862O60290 1169 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 FGF18O76093 207 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 CLCN3P51790 818 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 UBE3AQ05086 875 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 NTRK3Q16288 839 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 DUSP6Q16828 381 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 ZNF746Q6NUN9 644 aaPredicted RBP14.62□□□□□ -0.07
PRAME-206ENST00000406503 SUSD6Q92537 303 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 EDAQ92838 391 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 ZNF577Q9BSK1 485 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 GLT8D2Q9H1C3 349 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 TLR9Q9NR96 1032 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 TMEM161AQ9NX61 479 aa14.62□□□□□ -0.07
PRAME-206ENST00000406503 DENND3A2RUS2 1198 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 GPR182O15218 404 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 CIITAP33076 1130 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 METAP2P50579 478 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRAME-206ENST00000406503 SETQ01105 290 aaPredicted RBP14.61□□□□□ -0.07
PRAME-206ENST00000406503 UGCGQ16739 394 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 Q6ZUG5 572 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 TRMT1LQ7Z2T5 733 aaKnown RBP14.61□□□□□ -0.07
PRAME-206ENST00000406503 PPP2R3CQ969Q6 453 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 CASD1Q96PB1 797 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 KCNH6Q9H252 994 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 ADAMTS10Q9H324 1103 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 ELAC1Q9H777 363 aaKnown RBP14.61□□□□□ -0.07
PRAME-206ENST00000406503 TLE6Q9H808 572 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 TBC1D22BQ9NU19 505 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 GABBR1Q9UBS5 961 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 PCDHB12Q9Y5F1 795 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 PCDHA10Q9Y5I2 948 aa14.61□□□□□ -0.07
PRAME-206ENST00000406503 PBX3P40426 434 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 MRE11P49959 708 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 PRR16Q569H4 304 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 FAM43BQ6ZT52 329 aaPredicted RBP14.6□□□□□ -0.07
PRAME-206ENST00000406503 BMP8AQ7Z5Y6 402 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 SMAP1Q8IYB5 467 aaPredicted RBP14.6□□□□□ -0.07
PRAME-206ENST00000406503 REXO1Q8N1G1 1221 aaKnown RBP14.6□□□□□ -0.07
PRAME-206ENST00000406503 LRRC71Q8N4P6 559 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 PRSS33Q8NF86 280 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 PHKBQ93100 1093 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 S1PR5Q9H228 398 aa14.6□□□□□ -0.07
PRAME-206ENST00000406503 TDRD15B5MCY1 1934 aaKnown RBP14.6□□□□□ -0.07
PRAME-206ENST00000406503 HIDE1A8MVS5 230 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 MSH4O15457 936 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 PRPF3O43395 683 aaKnown RBP14.59□□□□□ -0.07
PRAME-206ENST00000406503 ATF7P17544 494 aaPredicted RBP14.59□□□□□ -0.07
PRAME-206ENST00000406503 NLRP11P59045 1033 aaKnown RBP14.59□□□□□ -0.07
PRAME-206ENST00000406503 ZXDAP98168 799 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 PLCB3Q01970 1234 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 KRT32Q14532 448 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 CLLU1OSQ5K130 101 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 SPOUT1Q5T280 376 aaKnown RBP14.59□□□□□ -0.07
PRAME-206ENST00000406503 IER5LQ5T953 404 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 PLPP4Q5VZY2 271 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 EFCAB12Q6NXP0 572 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 SYCE2Q6PIF2 218 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 TMEM184AQ6ZMB5 413 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 TRIM67Q6ZTA4 783 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 CKAP2LQ8IYA6 745 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 THNSL1Q8IYQ7 743 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 METTL13Q8N6R0 699 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 BRF1Q92994 677 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 GJA10Q969M2 543 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 ZNF668Q96K58 619 aaPredicted RBP14.59□□□□□ -0.07
PRAME-206ENST00000406503 CEP89Q96ST8 783 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 PHOX2BQ99453 314 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 PHF7Q9BWX1 381 aaPredicted RBP14.59□□□□□ -0.07
PRAME-206ENST00000406503 TMEM117Q9H0C3 514 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 ATP6V0A4Q9HBG4 840 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 CDH22Q9UJ99 828 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 SNX14Q9Y5W7 946 aa14.59□□□□□ -0.07
PRAME-206ENST00000406503 TMEM221A6NGB7 291 aa14.58□□□□□ -0.08
PRAME-206ENST00000406503 M0R296 226 aa14.58□□□□□ -0.08
PRAME-206ENST00000406503 CDC45O75419 566 aa14.58□□□□□ -0.08
PRAME-206ENST00000406503 PSAPP07602 524 aa14.58□□□□□ -0.08
PRAME-206ENST00000406503 LAG3P18627 525 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms