RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 KRT27Q7Z3Y8 459 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 EFCAB6Q5THR3 1501 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 SPAG7O75391 227 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 RWDD2BP57060 319 aa12.88□□□□□ -0.35
SMCR8-201ENST00000406438 EPM2AIP1Q7L775 607 aaPredicted RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 CHCHD3Q9NX63 227 aaKnown RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 SRPRBQ9Y5M8 271 aaKnown RBP12.88□□□□□ -0.35
SMCR8-201ENST00000406438 SERPINB2P05120 415 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 C16orf87Q6PH81 154 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 TTC37Q6PGP7 1564 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 PTPRKQ15262 1439 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 GYG2O15488 501 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ABTB1Q969K4 478 aaPredicted RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 COA7Q96BR5 231 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 INPP5FQ9Y2H2 1132 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ATP5HO75947 161 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 NDUFA10O95299 355 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 PPP6R3Q5H9R7 873 aaPredicted RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 SLC10A5Q5PT55 438 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 RBM41Q96IZ5 413 aaKnown RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ARAP3Q8WWN8 1544 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 COPEO14579 308 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 CALB1P05937 261 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 EIF4A3P38919 411 aaKnown RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 PEX3P56589 373 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 TMPRSS15P98073 1019 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 DPCR1Q3MIW9 517 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ZNF772Q68DY9 489 aaPredicted RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 TOGARAM2Q6ZUX3 1019 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 TRIML2Q8N7C3 387 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 OTUB1Q96FW1 271 aaPredicted RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ANAPC7Q9UJX3 599 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 NNTQ13423 1086 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ZC3H12BQ5HYM0 836 aaKnown RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 KIAA1586Q9HCI6 787 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 SH3GLB2Q9NR46 395 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 PTPRTO14522 1441 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 MTMR1Q13613 665 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ZNF667Q5HYK9 610 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 TWF2Q6IBS0 349 aaKnown RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 NAF1Q96HR8 494 aaKnown RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 AP1M1Q9BXS5 423 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ASNSD1Q9NWL6 643 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 KPNA7A9QM74 516 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
SMCR8-201ENST00000406438 CAV1Q03135 178 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 ULK4Q96C45 1275 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 GINM1Q9NU53 330 aa12.87□□□□□ -0.35
SMCR8-201ENST00000406438 INSRP06213 1382 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 CCDC151A5D8V7 595 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 ASNSP08243 561 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 ZBED6P86452 979 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 MIGA2Q7L4E1 593 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 PATL1Q86TB9 770 aaKnown RBP12.86□□□□□ -0.35
SMCR8-201ENST00000406438 TTC13Q8NBP0 860 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 LSG1Q9H089 658 aaKnown RBP12.86□□□□□ -0.35
SMCR8-201ENST00000406438 STX18Q9P2W9 335 aaKnown RBP12.86□□□□□ -0.35
SMCR8-201ENST00000406438 HEY1Q9Y5J3 304 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 PHKA2P46019 1235 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 BBS9Q3SYG4 887 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 PIGSQ96S52 555 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 CACNA1FO60840 1977 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 HUS1O60921 280 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 KCNA4P22459 653 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 HOXA13P31271 388 aaPredicted RBP12.86□□□□□ -0.35
SMCR8-201ENST00000406438 AARSP49588 968 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMCR8-201ENST00000406438 ARL4CP56559 192 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 ABHD8Q96I13 439 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 PITPNM3Q9BZ71 974 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 GTSE1Q9NYZ3 720 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 MAPK6Q16659 721 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 ARL6IP4Q66PJ3 421 aaKnown RBP12.86□□□□□ -0.35
SMCR8-201ENST00000406438 CYTH2Q99418 400 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 SMYD3Q9H7B4 428 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 KRT87PA6NCN2 255 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 OCA2Q04671 838 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 CATSPER4Q7RTX7 472 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 RAB42Q8N4Z0 105 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 FAM96AQ9H5X1 160 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 PIDD1Q9HB75 910 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 COPRSQ9NQ92 184 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 MYH8P13535 1937 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 DNAJC6O75061 913 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 TADA3O75528 432 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 NR1H3Q13133 447 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 E2F5Q15329 346 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 NAALADL2Q58DX5 795 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 RTKN2Q8IZC4 609 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 TRIM62Q9BVG3 475 aa12.86□□□□□ -0.35
SMCR8-201ENST00000406438 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
SMCR8-201ENST00000406438 RRP15Q9Y3B9 282 aaKnown RBP12.86□□□□□ -0.35
SMCR8-201ENST00000406438 CDC42BPAQ5VT25 1732 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms