RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 POFUT1Q9H488 388 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 HSPBP1Q9NZL4 362 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 SAP30BPQ9UHR5 308 aaKnown RBP6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 PPP2R3BQ9Y5P8 575 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 NUMBLQ9Y6R0 609 aa6.06□□□□□ -1.44
HMGB3P18-201ENST00000406327 FRMPD2Q68DX3 1309 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 RASSF10A6NK89 507 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 GOLGA6L22H0YM25 854 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 ABLIM1O14639 778 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 PRPF6O94906 941 aaKnown RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 PRLP01236 227 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 BCAR1P56945 870 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 ALDH6A1Q02252 535 aaKnown RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 GRIN1Q05586 938 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 ADCY2Q08462 1091 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 DBPQ10586 325 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 PLCL1Q15111 1095 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 CT83Q5H943 113 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 PRAMEF9Q5VWM5 478 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 RTN4RL1Q86UN2 441 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 CILP2Q8IUL8 1156 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 RBM12BQ8IXT5 1001 aaKnown RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 WDR48Q8TAF3 677 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 EAF2Q96CJ1 260 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 TOE1Q96GM8 510 aaKnown RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 PAWRQ96IZ0 340 aaKnown RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 MPHOSPH6Q99547 160 aaKnown RBP6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 RNF38Q9H0F5 515 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 FAM204AQ9H8W3 233 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 DTLQ9NZJ0 730 aa6.05□□□□□ -1.44
HMGB3P18-201ENST00000406327 ANO9A1A5B4 782 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 LCHNA4D1U4 455 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 ACOT7O00154 380 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 NDUFS2O75306 463 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 ZRANB2O95218 330 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 APOL3O95236 402 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 IFIT2P09913 472 aaKnown RBP6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 SLC6A3Q01959 620 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 KIR3DS1Q14943 382 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 MUM1Q2TAK8 710 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 CCDC178Q5BJE1 867 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 SYCP2LQ5T4T6 812 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 KCNK18Q7Z418 384 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 SRGAP1Q7Z6B7 1085 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 CATIPQ7Z7H3 387 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 ZC3H18Q86VM9 953 aaKnown RBP6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 WFDC3Q8IUB2 231 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 FAM126BQ8IXS8 530 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 ARRDC4Q8NCT1 418 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 SLC35G2Q8TBE7 412 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 RUNDC1Q96C34 613 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 FOXRED1Q96CU9 486 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 FAM193BQ96PV7 902 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 MAP3K14Q99558 947 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 MYL10Q9BUA6 226 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 PAK6Q9NQU5 681 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 PRDM7Q9NQW5 492 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 ANLNQ9NQW6 1124 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 USP25Q9UHP3 1055 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 SIT1Q9Y3P8 196 aa6.04□□□□□ -1.44
HMGB3P18-201ENST00000406327 PRSS38A1L453 326 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 ZC3H12DA2A288 527 aaKnown RBP6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 PRAMEF22A3QJZ6 481 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 AP1G1O43747 822 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 CTNND1O60716 968 aaKnown RBP6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 CLEC2LP0C7M8 214 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 OSMP13725 252 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 SPINK2P20155 84 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 PTGS1P23219 599 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 AFMP43652 599 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 MAPKAPK2P49137 400 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 GPR15P49685 360 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 SAFB2Q14151 953 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 SAFBQ15424 915 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 PITRM1Q5JRX3 1037 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 GJC2Q5T442 439 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 PRAMEF18Q5VWM3 479 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 ETV3LQ6ZN32 361 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 MIB1Q86YT6 1006 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 TP53INP2Q8IXH6 220 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 THEMISQ8N1K5 641 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 PJA1Q8NG27 643 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 OR14C36Q8NHC7 312 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 ABHD4Q8TB40 342 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 TAAR9Q96RI9 348 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 SLC6A17Q9H1V8 727 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 C19orf44Q9H6X5 657 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 BTBD7Q9P203 1132 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 EDARQ9UNE0 448 aa6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 YBX2Q9Y2T7 364 aaKnown RBP6.03□□□□□ -1.44
HMGB3P18-201ENST00000406327 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 NRP2O60462 931 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 MED26O95402 600 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 ENO2P09104 434 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 C5AR1P21730 350 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 NKX3-2P78367 333 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 JAG1P78504 1218 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 KIF23Q02241 960 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 GRM3Q14832 879 aa6.02□□□□□ -1.45
HMGB3P18-201ENST00000406327 RAB3GAP1Q15042 981 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms